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BJP_Ig2103_Hor_218_2014_Dechloromonas_rel_57_6_partial

BJP_IG2103_Dechloromonas_57_6
In projects: BJP_IG2103  |  horonobe_genomes

Consensus taxonomy: Dechloromonas  →  Rhodocyclales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Annoying sediment metagenome obscuring results

Displaying items 351-400 of 467 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2103_scaffold_10125
Genus: Dechloromonas (50%)
4 3387 bp 53.73 6.02 82.82
bjp_ig2103_scaffold_18264
Species: Dechloromonas aromatica (100%)
1 2041 bp 59.19 6.03 79.52
bjp_ig2103_scaffold_4197
Genus: Dechloromonas (88.89%)
9 7144 bp 54.30 6.03 84.95
bjp_ig2103_scaffold_9545
Species: Dechloromonas aromatica (60%)
5 3551 bp 56.66 6.04 96.48
bjp_ig2103_scaffold_12425
Species: Dechloromonas aromatica (50%)
4 2858 bp 59.55 6.04 98.46
bjp_ig2103_scaffold_11450
Species: Dechloromonas aromatica (50%)
4 3052 bp 57.70 6.05 94.07
bjp_ig2103_scaffold_3489
Genus: Dechloromonas (66.67%)
9 8284 bp 57.89 6.05 86.52
bjp_ig2103_scaffold_4093
Genus: Dechloromonas (81.82%)
11 7300 bp 56.52 6.06 99.29
bjp_ig2103_scaffold_17866
Species: uncultured bacterium (66.67%)
3 2079 bp 55.99 6.06 96.10
bjp_ig2103_scaffold_6675
Genus: Dechloromonas (60%)
5 4808 bp 56.30 6.08 94.84
bjp_ig2103_scaffold_12527
Species: Dechloromonas aromatica (50%)
4 2838 bp 61.91 6.08 99.89
bjp_ig2103_scaffold_10441
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
6 3306 bp 57.83 6.08 91.83
bjp_ig2103_scaffold_6267
Genus: Dechloromonas (66.67%)
6 5053 bp 58.60 6.09 98.08
bjp_ig2103_scaffold_12289
Species: BJP_08E140C01_Dechloromonas_61_78 (66.67%)
3 2882 bp 60.10 6.09 100.14
bjp_ig2103_scaffold_18270
Species: BJP_IG2103_Rhodocyclales_63_50 (50%)
2 2040 bp 63.14 6.10 87.21
bjp_ig2103_scaffold_14710
Species: Dechloromonas aromatica (66.67%)
3 2461 bp 58.88 6.10 90.94
bjp_ig2103_scaffold_7049
Genus: Dechloromonas (50%)
4 4571 bp 56.36 6.10 83.81
bjp_ig2103_scaffold_10135
Species: BJP_08E140C01_Dechloromonas_61_78 (100%)
1 3384 bp 59.87 6.12 100.00
bjp_ig2103_scaffold_5247
Species: uncultured bacterium (75%)
8 5875 bp 53.92 6.13 94.01
bjp_ig2103_scaffold_17860
Species: BJP_IG2103_Dechloromonas_63_51 (66.67%)
3 2079 bp 58.06 6.13 94.66
bjp_ig2103_scaffold_15949
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
4 2296 bp 56.75 6.14 100.35
bjp_ig2103_scaffold_15738
Species: Dechloromonas aromatica (66.67%)
3 2321 bp 54.33 6.14 82.59
bjp_ig2103_scaffold_10861
Species: Dechloromonas aromatica (50%)
4 3196 bp 57.35 6.15 89.46
bjp_ig2103_scaffold_18453
Species: Dechloromonas aromatica (100%)
1 2024 bp 58.50 6.15 99.90
bjp_ig2103_scaffold_12049
Species: uncultured bacterium (66.67%)
3 2922 bp 54.69 6.16 76.28
bjp_ig2103_scaffold_10378
Species: BJP_08E140C01_Dechloromonas_61_78 (66.67%)
3 3324 bp 55.63 6.18 85.29
bjp_ig2103_scaffold_9589
Species: BJP_IG2103_Dechloromonas_63_51 (100%)
1 3540 bp 56.10 6.19 76.10
bjp_ig2103_scaffold_14717
Species: Dechloromonas aromatica (66.67%)
6 3676 bp 48.94 6.20 92.71
bjp_ig2103_scaffold_5202
Species: Dechloromonas aromatica (50%)
6 5912 bp 58.14 6.22 96.06
bjp_ig2103_scaffold_6123
Genus: Dechloromonas (50%)
4 5156 bp 59.41 6.23 89.49
bjp_ig2103_scaffold_16608
Species: BJP_IG2103_Dechloromonas_60_92 (50%)
2 2216 bp 62.09 6.23 77.71
bjp_ig2103_scaffold_6468
Species: Dechloromonas aromatica (66.67%)
6 4928 bp 58.95 6.24 90.65
bjp_ig2103_scaffold_16879
Species: uncultured bacterium (80%)
5 2184 bp 54.12 6.25 85.30
bjp_ig2103_scaffold_3411
Species: Dechloromonas aromatica (50%)
8 8431 bp 57.21 6.26 95.65
bjp_ig2103_scaffold_6341
Species: Dechloromonas aromatica (66.67%)
6 5005 bp 55.78 6.26 97.58
bjp_ig2103_scaffold_18614
Genus: Dechloromonas (66.67%)
3 2008 bp 55.83 6.27 71.56
bjp_ig2103_scaffold_9430
Species: uncultured bacterium (60%)
5 3585 bp 55.98 6.28 87.73
bjp_ig2103_scaffold_18430
Species: uncultured bacterium (66.67%)
3 2025 bp 58.12 6.30 97.78
bjp_ig2103_scaffold_9691
Species: BJP_IG2103_Dechloromonas_60_92 (66.67%)
3 3514 bp 56.69 6.32 98.35
bjp_ig2103_scaffold_20531
Species: BJP_IG2103_Dechloromonas_63_51 (100%)
1 1849 bp 56.14 6.33 99.95
bjp_ig2103_scaffold_12636
Species: BJP_08E140C01_Dechloromonas_61_78 (66.67%)
3 2818 bp 56.32 6.33 87.30
bjp_ig2103_scaffold_7003
Genus: Dechloromonas (66.67%)
6 4600 bp 53.85 6.33 79.50
bjp_ig2103_scaffold_8563
Species: uncultured bacterium (66.67%)
3 3888 bp 56.02 6.33 81.17
bjp_ig2103_scaffold_8348
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
4 3977 bp 52.23 6.34 80.41
bjp_ig2103_scaffold_5535
Species: Dechloromonas aromatica (50%)
4 5610 bp 57.61 6.34 92.57
bjp_ig2103_scaffold_13823
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
2 2597 bp 58.88 6.35 94.61
bjp_ig2103_scaffold_19395
Species: uncultured bacterium (66.67%)
3 1938 bp 54.13 6.35 90.09
bjp_ig2103_scaffold_9436
Species: Dechloromonas aromatica (66.67%)
3 3583 bp 60.17 6.36 99.64
bjp_ig2103_scaffold_19760
Species: uncultured bacterium (100%)
1 1907 bp 57.94 6.37 87.47
bjp_ig2103_scaffold_9645
Genus: Dechloromonas (60%)
5 3527 bp 58.58 6.38 87.78
Displaying items 351-400 of 467 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.