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BJP_Ig2103_Hor_218_2014_Dechloromonas_rel_57_6_partial

BJP_IG2103_Dechloromonas_57_6
In projects: BJP_IG2103  |  horonobe_genomes

Consensus taxonomy: Dechloromonas  →  Rhodocyclales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Annoying sediment metagenome obscuring results

Displaying items 401-450 of 467 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2103_scaffold_9199
Genus: Dechloromonas (100%)
3 3668 bp 62.24 6.38 85.55
bjp_ig2103_scaffold_16673
Species: uncultured bacterium (75%)
4 2210 bp 52.94 6.38 89.05
bjp_ig2103_scaffold_20833
Species: uncultured bacterium (100%)
1 1826 bp 54.55 6.41 96.28
bjp_ig2103_scaffold_12089
Species: Dechloromonas aromatica (80%)
5 2914 bp 58.20 6.43 84.18
bjp_ig2103_scaffold_16395
Species: Dechloromonas aromatica (66.67%)
3 2241 bp 55.51 6.43 72.96
bjp_ig2103_scaffold_6620
Genus: Dechloromonas (57.14%)
7 4841 bp 54.31 6.44 93.58
bjp_ig2103_scaffold_8125
Species: uncultured bacterium (75%)
4 4074 bp 54.79 6.44 93.52
bjp_ig2103_scaffold_12379
Species: Dechloromonas aromatica (66.67%)
3 2865 bp 51.83 6.44 89.21
bjp_ig2103_scaffold_7695
Genus: Dechloromonas (80%)
5 4255 bp 55.63 6.49 87.43
bjp_ig2103_scaffold_4274
Species: uncultured bacterium (50%)
8 7030 bp 50.17 6.49 87.52
bjp_ig2103_scaffold_16057
Species: BJP_08E140C01_Anaerolineales_40_8 (100%)
3 2282 bp 47.98 6.51 92.42
bjp_ig2103_scaffold_17905
Species: BJP_IG2103_Dechloromonas_63_51 (100%)
2 2075 bp 55.28 6.51 93.83
bjp_ig2103_scaffold_2816
Species: uncultured bacterium (55.56%)
9 9985 bp 57.68 6.52 96.02
bjp_ig2103_scaffold_4159
Species: BJP_08E140C01_Dechloromonas_61_78 (50%)
6 7193 bp 58.42 6.53 95.72
bjp_ig2103_scaffold_15488
Species: uncultured bacterium (50%)
2 2354 bp 57.09 6.56 88.06
bjp_ig2103_scaffold_13932
Species: BJP_08E140C01_Dechloromonas_61_78 (50%)
2 2580 bp 59.73 6.57 100.58
bjp_ig2103_scaffold_4996
Species: BJP_IG2103_Dechloromonas_60_92 (60%)
5 6121 bp 60.46 6.57 94.84
bjp_ig2103_scaffold_8421
Species: BJP_IG2103_Dechloromonas_63_51 (60%)
5 3944 bp 55.96 6.58 81.62
bjp_ig2103_scaffold_12712
Species: Dechloromonas aromatica (100%)
3 2802 bp 59.49 6.58 101.82
bjp_ig2103_scaffold_14644
Genus: Dechloromonas (50%)
6 2471 bp 54.67 6.62 78.35
bjp_ig2103_scaffold_7558
Genus: Dechloromonas (80%)
5 4327 bp 54.03 6.62 93.60
bjp_ig2103_scaffold_9700
Genus: Dechloromonas (100%)
5 3510 bp 58.95 6.62 93.25
bjp_ig2103_scaffold_9647
Genus: Dechloromonas (80%)
5 3527 bp 58.66 6.63 95.95
bjp_ig2103_scaffold_11859
Species: Dechloromonas aromatica (66.67%)
3 2959 bp 56.78 6.64 99.36
bjp_ig2103_scaffold_15699
Species: BJP_IG2103_Dechloromonas_63_51 (100%)
2 2326 bp 59.24 6.64 97.38
bjp_ig2103_scaffold_9348
Genus: Dechloromonas (50%)
4 3612 bp 55.12 6.64 90.53
bjp_ig2103_scaffold_10676
Genus: Dechloromonas (100%)
5 3244 bp 58.54 6.66 91.65
bjp_ig2103_scaffold_12536
Species: Dechloromonas aromatica (50%)
4 2836 bp 57.79 6.66 96.16
bjp_ig2103_scaffold_14797
Species: BJP_IG2103_Dechloromonas_60_92 (50%)
4 2447 bp 59.54 6.68 88.64
bjp_ig2103_scaffold_11607
Species: uncultured bacterium (75%)
4 3017 bp 56.12 6.71 101.43
bjp_ig2103_scaffold_7581
Species: uncultured bacterium (50%)
6 4314 bp 52.62 6.71 94.65
bjp_ig2103_scaffold_11299
Species: uncultured bacterium (50%)
4 3087 bp 55.88 6.71 88.63
bjp_ig2103_scaffold_18467
Species: BJP_IG2103_Dechloromonas_60_92 (66.67%)
3 2022 bp 58.01 6.75 97.92
bjp_ig2103_scaffold_5566
Genus: Dechloromonas (60%)
5 5594 bp 54.95 6.76 86.66
bjp_ig2103_scaffold_18789
Species: uncultured bacterium (66.67%)
3 1991 bp 56.40 6.78 88.15
bjp_ig2103_scaffold_16646
Species: Dechloromonas aromatica (66.67%)
3 2212 bp 55.29 6.78 88.02
bjp_ig2103_scaffold_12474
Genus: Dechloromonas (60%)
5 2849 bp 55.18 6.79 85.71
bjp_ig2103_scaffold_8726
Genus: Dechloromonas (66.67%)
3 3832 bp 58.14 6.81 82.99
bjp_ig2103_scaffold_10206
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
4 3363 bp 60.57 6.82 100.18
bjp_ig2103_scaffold_16387
Species: BJP_IG2103_Dechloromonas_60_92 (50%)
4 2242 bp 61.15 6.82 99.96
bjp_ig2103_scaffold_7153
Genus: Dechloromonas (50%)
6 4524 bp 57.63 6.83 95.09
bjp_ig2103_scaffold_6677
Genus: Dechloromonas (75%)
4 4806 bp 56.22 6.84 95.76
bjp_ig2103_scaffold_12629
Species: Dechloromonas aromatica (75%)
4 2819 bp 60.41 6.86 97.27
bjp_ig2103_scaffold_10202
Species: uncultured bacterium (50%)
4 3364 bp 55.74 6.87 92.93
bjp_ig2103_scaffold_12115
Species: Dechloromonas aromatica (50%)
4 2909 bp 55.79 6.91 90.34
bjp_ig2103_scaffold_16519
Species: uncultured bacterium (50%)
2 2226 bp 50.90 6.94 97.98
bjp_ig2103_scaffold_19067
Species: Dechloromonas aromatica (66.67%)
3 1965 bp 56.84 7.02 78.32
bjp_ig2103_scaffold_13802
Genus: Dechloromonas (100%)
3 2603 bp 57.40 7.03 84.94
bjp_ig2103_scaffold_8711
Species: uncultured bacterium (90%)
10 3837 bp 50.79 7.11 93.82
bjp_ig2103_scaffold_6894
Genus: Dechloromonas (66.67%)
6 4669 bp 55.67 7.13 88.99
Displaying items 401-450 of 467 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.