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bjp_ig2103_scaffold_2111

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_2111_1
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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247..1335
DNA (1089bp) protein (363aa)
ribD; riboflavin biosynthesis protein RibD (EC:3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEF5_ACEWD
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium wo
bjp_ig2103_scaffold_2111_2
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1340..2002
DNA (663bp) protein (221aa)
ribE; riboflavin synthase alpha subunit RibE (EC:2.5.1.9)
Riboflavin synthase alpha subunit RibE {ECO:0000313|EMBL:AFA46870.1}; EC=2.5.1.9 {ECO:0000313|EMBL:AFA46870.1};; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae;
Riboflavin synthase alpha subunit RibE n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEF6_ACEWD
bjp_ig2103_scaffold_2111_3
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2032..3234
DNA (1203bp) protein (401aa)
ribAB; riboflavin biosynthesis protein RibAB (EC:3.5.4.25 4.1.99.12)
Riboflavin biosynthesis protein RibBA n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEF7_ACEWD
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobact
bjp_ig2103_scaffold_2111_4
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3248..3715
DNA (468bp) protein (156aa)
ribH; riboflavin synthase beta subunit RibH (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEF8_ACEWD
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
bjp_ig2103_scaffold_2111_5
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3838..4650)
DNA (813bp) protein (271aa)
mttA4; methyltransferase 2 (EC:2.1.1.-)
Methyltransferase 2 MttA4 {ECO:0000313|EMBL:AFA48348.1}; EC=2.1.1.- {ECO:0000313|EMBL:AFA48348.1};; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacteriu
Methyltransferase 2 MttA4 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LGM0_ACEWD
bjp_ig2103_scaffold_2111_6
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4714..5343)
DNA (630bp) protein (210aa)
Corrinoid protein MttC13 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LGL9_ACEWD
mttC13; corrinoid protein MttC13
Corrinoid protein MttC13 {ECO:0000313|EMBL:AFA48347.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain A
bjp_ig2103_scaffold_2111_7
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5491..7011)
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI000364E28D
yeaV; choline/carnitine/betaine transport
Choline/carnitine/betaine transport {ECO:0000313|EMBL:AHM56069.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminop
bjp_ig2103_scaffold_2111_8
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7111..8400)
DNA (1290bp) protein (430aa)
Major facilitator superfamily MFS_1 n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GQM8_EUBLK rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADO39320.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (st
bjp_ig2103_scaffold_2111_9
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8454..9905)
DNA (1452bp) protein (484aa)
MttB2 n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GQM9_EUBLK rbh
protein MttB2 rbh
MttB2 {ECO:0000313|EMBL:ADO39321.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
bjp_ig2103_scaffold_2111_10
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10117..11535
DNA (1419bp) protein (473aa)
Putative PAS/PAC sensor protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GR40_EUBLK
putative PAS/PAC sensor protein
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ADO39482.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain
bjp_ig2103_scaffold_2111_11
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11607..12236)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEW9_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA46875.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain AT
bjp_ig2103_scaffold_2111_12
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12321..12695)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEX0_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA46876.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain AT
bjp_ig2103_scaffold_2111_13
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12819..13055
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEX1_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA46877.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain AT
bjp_ig2103_scaffold_2111_14
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13045..14310
DNA (1266bp) protein (422aa)
Xaa-His dipeptidase n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEX2_ACEWD rbh
xaa-His dipeptidase rbh
Xaa-His dipeptidase {ECO:0000313|EMBL:AFA46878.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 2
bjp_ig2103_scaffold_2111_15
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14366..15631
DNA (1266bp) protein (422aa)
Xaa-His dipeptidase n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEX3_ACEWD rbh
xaa-His dipeptidase
Xaa-His dipeptidase {ECO:0000313|EMBL:AFA46879.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 2
bjp_ig2103_scaffold_2111_16
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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15946..16884
DNA (939bp) protein (313aa)
hypothetical protein AcelC_23884 id=3761170 bin=GWF2_Clostridiales_36_10 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
glycosyl transferase family protein Tax=GWF2_Clostridiales_36_10_curated
glycosyl transferase family protein
bjp_ig2103_scaffold_2111_17
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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16885..18372
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MXZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99011.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
bjp_ig2103_scaffold_2111_18
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18489..19469
DNA (981bp) protein (327aa)
birA; biotin--acetyl-CoA-carboxylase ligase BirA (EC:6.3.4.15)
Biotin--acetyl-CoA-carboxylase ligase BirA n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEX4_ACEWD rbh
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978
bjp_ig2103_scaffold_2111_19
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19480..20046
DNA (567bp) protein (189aa)
Biotin biosynthesis protein BioY n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEX5_ACEWD
bioY; biotin biosynthesis protein BioY
Biotin biosynthesis protein BioY {ECO:0000313|EMBL:AFA46881.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (
bjp_ig2103_scaffold_2111_20
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20339..21322
DNA (984bp) protein (328aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphil
Lipoyltransferase and lipoate-protein ligase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MEB8_ALKOO
lipoyltransferase and lipoate-protein ligase
bjp_ig2103_scaffold_2111_21
Oribacterium parvum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21347..21586
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Oribacterium RepID=G9WQ34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL10467.1}; TaxID=796943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium parvum ACB1.;"
branched-chain alpha-keto acid dehydrogenase subunit E2
bjp_ig2103_scaffold_2111_22
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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21600..22457
DNA (858bp) protein (286aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00035D3C5E rbh
lipoic acid synthetase
bjp_ig2103_scaffold_2111_23
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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22454..23434
DNA (981bp) protein (327aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Te
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI0003624957 rbh
lipoate-protein ligase A
bjp_ig2103_scaffold_2111_24
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23686..25170
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEY2_ACEWD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA46888.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain AT
bjp_ig2103_scaffold_2111_25
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25213..25584
DNA (372bp) protein (124aa)
Arsenate reductase ArsC n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEY3_ACEWD
arsC; arsenate reductase ArsC
Arsenate reductase ArsC {ECO:0000313|EMBL:AFA46889.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain AT
bjp_ig2103_scaffold_2111_26
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25694..25846
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEY4_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA46890.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain AT
bjp_ig2103_scaffold_2111_27
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26201..26794
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEY5_ACEWD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA46891.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain AT
bjp_ig2103_scaffold_2111_28
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26828..27571
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEY6_ACEWD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA46892.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain AT
bjp_ig2103_scaffold_2111_29
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27607..28407
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEY7_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA46893.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain AT
bjp_ig2103_scaffold_2111_30
unknown

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comp(28646..28744)
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 30 items

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