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bjp_ig2103_scaffold_402_curated

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_402_curated_1
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2..358
DNA (357bp) protein (119aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:AAZ48353.1}; EC=4.1.2.13 {ECO:0000313|EMBL:AAZ48353.1};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Fructose-bisphosphate aldolase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q479X8_DECAR
bjp_ig2103_scaffold_402_curated_2
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

446..1147
DNA (702bp) protein (234aa)
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Ribulose-phosphate 3-epimerase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AB9_DECAR
bjp_ig2103_scaffold_402_curated_3

Not on your lists

1149..1811
DNA (663bp) protein (221aa)
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
phosphoglycolate phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2G105_9BACT
bjp_ig2103_scaffold_402_curated_4
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1831..2283)
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Thauera RepID=N6YHH7_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO81792.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
hypothetical protein
bjp_ig2103_scaffold_402_curated_5
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2299..2751)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DTK4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU80685.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hypothetical protein
bjp_ig2103_scaffold_402_curated_6
unknown

Not on your lists

2934..3092
DNA (159bp) protein (53aa)

This feature has no annotations

bjp_ig2103_scaffold_402_curated_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3136..4701)
DNA (1566bp) protein (522aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q479Y2_DECAR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ48349.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_402_curated_8
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4721..5389)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q479Y3_DECAR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ48348.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_402_curated_9
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5386..10803)
DNA (5418bp) protein (1806aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q479Y4_DECAR rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ48347.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
hypothetical protein rbh
bjp_ig2103_scaffold_402_curated_10
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10840..11673)
DNA (834bp) protein (278aa)
Peptidase C14, caspase catalytic subunit p20 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q479Y5_DECAR rbh
peptidase C14, caspase catalytic subunit p20 rbh
Peptidase C14, caspase catalytic subunit p20 {ECO:0000313|EMBL:AAZ48346.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_402_curated_11
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11729..12316)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6YEA2_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO78304.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
hypothetical protein
bjp_ig2103_scaffold_402_curated_12
unknown

Not on your lists

comp(13208..13447)
DNA (240bp) protein (80aa)

This feature has no annotations

bjp_ig2103_scaffold_402_curated_13
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13528..14205)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Burkholderia cepacia GG4 RepID=J7JGC1_BURCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFQ50051.1}; TaxID=1009846 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia GG4.;"
bjp_ig2103_scaffold_402_curated_14
unknown

Not on your lists

14684..14974
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003633F2F
snr1; cytochrome C Snr1
bjp_ig2103_scaffold_402_curated_15
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15035..15661)
DNA (627bp) protein (209aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase [EC:2.7.8.8] rbh
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Acidovorax radicis RepID=UPI000237869E rbh
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:EHL23046.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
bjp_ig2103_scaffold_402_curated_16
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16043..16588
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AG78_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34991.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
bjp_ig2103_scaffold_402_curated_17
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16614..18263
DNA (1650bp) protein (550aa)
Octaheme tetrathionate reductase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9Z9_9PROT rbh
octaheme tetrathionate reductase rbh
Octaheme tetrathionate reductase {ECO:0000313|EMBL:BAN34990.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
bjp_ig2103_scaffold_402_curated_18
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18268..18906
DNA (639bp) protein (213aa)
Thiosulfate reductase cytochrome B subunit {ECO:0000313|EMBL:EWS62483.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
Cytochrome B561 id=1274596 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
cytochrome B561; K08354 thiosulfate reductase cytochrome b subunit
bjp_ig2103_scaffold_402_curated_19
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18918..19691)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AK53_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34979.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
bjp_ig2103_scaffold_402_curated_20
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19774..20838)
DNA (1065bp) protein (355aa)
fructose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] rbh
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLE6_AZOSU rbh
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype {ECO:0000313|EMBL:AEV24475.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
bjp_ig2103_scaffold_402_curated_21
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20877..22310)
DNA (1434bp) protein (478aa)
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] rbh
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Pyruvate kinase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47A07_DECAR rbh
bjp_ig2103_scaffold_402_curated_22
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22374..23558)
DNA (1185bp) protein (395aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] rbh
Phosphoglycerate kinase {ECO:0000255|HAMAP-Rule:MF_00145}; EC=2.7.2.3 {ECO:0000255|HAMAP-Rule:MF_00145};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Phosphoglycerate kinase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=PGK_DECAR rbh
bjp_ig2103_scaffold_402_curated_23
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23579..24667)
DNA (1089bp) protein (363aa)
glyceraldehyde 3-phosphate dehydrogenase; K03472 D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] rbh
Glyceraldehyde 3-phosphate dehydrogenase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47A09_DECAR rbh
Glyceraldehyde 3-phosphate dehydrogenase {ECO:0000313|EMBL:AAZ48322.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_402_curated_24
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24840..25349
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QP95_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV25948.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
bjp_ig2103_scaffold_402_curated_25
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25427..26455)
DNA (1029bp) protein (343aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] rbh
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47A10_DECAR rbh
bjp_ig2103_scaffold_402_curated_26
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26481..28487)
DNA (2007bp) protein (669aa)
transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] rbh
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Transketolase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47A11_DECAR rbh
bjp_ig2103_scaffold_402_curated_27
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28596..29249)
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47A12_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ48319.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_402_curated_28
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29291..30313)
DNA (1023bp) protein (341aa)
D-fructose 1,6-bisphosphatase (EC:3.1.3.11); K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] rbh
Fructose-1,6-bisphosphatase class 1 1 {ECO:0000255|HAMAP-Rule:MF_01855}; Short=FBPase class 1 1 {ECO:0000255|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000255|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 1 {ECO:0000255|HAMAP-Rule:MF_01855}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Fructose-1,6-bisphosphatase class 1 1 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=F16A1_DECAR rbh
bjp_ig2103_scaffold_402_curated_29
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30347..32833)
DNA (2487bp) protein (829aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47A14_DECAR rbh
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) rbh
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:AAZ48317.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_402_curated_30
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32931..33485)
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47A15_DECAR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ48316.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Displaying items 1-30 of 42 in total

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