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bjp_ig2103_scaffold_135_curated

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Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_135_curated_1
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

245..1531
DNA (1287bp) protein (429aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMF7_AZOSU rbh
metalloendopeptidase-like membrane protein rbh
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:AEV25735.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
bjp_ig2103_scaffold_135_curated_2
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1591..1941)
DNA (351bp) protein (117aa)
Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=ERPA_DECAR
iron-sulfur cluster insertion protein ErpA; K15724 iron-sulfur cluster insertion protein
Putative iron-sulfur cluster insertion protein ErpA {ECO:0000255|HAMAP-Rule:MF_01380}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_3

Not on your lists

comp(2004..2405)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FKJ6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE18319.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
bjp_ig2103_scaffold_135_curated_4
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2415..2996)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IC3_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ45408.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_5
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3323..3715)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IC4_DECAR
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_6
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3725..4153)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RL13_DECAR
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4668..5096
DNA (429bp) protein (143aa)
OsmC-like protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IC6_DECAR
OsmC-like protein; K07397 putative redox protein
OsmC-like protein {ECO:0000313|EMBL:AAZ45405.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_8
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5103..5726)
DNA (624bp) protein (208aa)
ubiquinone biosynthesis protein; K06134 ubiquinone biosynthesis monooxygenase Coq7 [EC:1.14.13.-] rbh
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000255|HAMAP-Rule:MF_01658}; EC=1.14.13.- {ECO:0000255|HAMAP-Rule:MF_01658};; 5-demethoxyubiquinone hydroxylase {ECO:0000255|HAMAP-Rule:MF_01658}; Short=DMQ hydroxylase {ECO:0000255|HAMAP-Rule:MF_01658};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=COQ7_DECAR rbh
bjp_ig2103_scaffold_135_curated_9
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5737..6252)
DNA (516bp) protein (172aa)
Putative lipoprotein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IC8_DECAR
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AAZ45403.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_10
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6257..6799)
DNA (543bp) protein (181aa)
dinucleoside polyphosphate hydrolase; K08311 putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] rbh
RNA pyrophosphohydrolase {ECO:0000255|HAMAP-Rule:MF_00298}; EC=3.6.1.- {ECO:0000255|HAMAP-Rule:MF_00298};; (Di)nucleoside polyphosphate hydrolase {ECO:0000255|HAMAP-Rule:MF_00298}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
RNA pyrophosphohydrolase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RPPH_DECAR rbh
bjp_ig2103_scaffold_135_curated_11
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6911..8641
DNA (1731bp) protein (577aa)
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] rbh
Proline--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_01569}; EC=6.1.1.15 {ECO:0000255|HAMAP-Rule:MF_01569};; Prolyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_01569}; Short=ProRS {ECO:0000255|HAMAP-Rule:MF_01569};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Proline--tRNA ligase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=SYP_DECAR rbh
bjp_ig2103_scaffold_135_curated_12
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8629..9240
DNA (612bp) protein (204aa)
Lytic transglycosylase, catalytic n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47ID1_DECAR rbh
lytic transglycosylase, catalytic rbh
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:AAZ45400.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_13
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9241..10617)
DNA (1377bp) protein (459aa)
Signal recognition particle protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47ID2_DECAR rbh
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_14
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10647..11486
DNA (840bp) protein (280aa)
Cytochrome c assembly protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47ID3_DECAR rbh
cytochrome c assembly protein rbh
Cytochrome c assembly protein {ECO:0000313|EMBL:AAZ45398.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_15

Not on your lists

11746..13461
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FA13_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE18402.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
type II secretion system protein E; K02652 type IV pilus assembly protein PilB rbh
bjp_ig2103_scaffold_135_curated_16
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13473..14699
DNA (1227bp) protein (409aa)
Type II secretion system protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47ID6_DECAR rbh
type II secretion system protein; K02653 type IV pilus assembly protein PilC rbh
Type II secretion system protein {ECO:0000313|EMBL:AAZ45395.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_17
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14699..15550
DNA (852bp) protein (284aa)
type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] rbh
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47ID7_DECAR rbh
bjp_ig2103_scaffold_135_curated_18
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15621..15872
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47ID8_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ45393.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_19
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15857..16486
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47ID9_DECAR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ45392.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_20
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16507..18306
DNA (1800bp) protein (600aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] rbh
Aspartate--tRNA(Asp/Asn) ligase {ECO:0000255|HAMAP-Rule:MF_00044}; EC=6.1.1.23 {ECO:0000255|HAMAP-Rule:MF_00044};; Aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=AspRS {ECO:0000255|HAMAP-Rule:MF_00044};; Non-discriminating aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=ND-AspRS {ECO:0000255|HAMAP-Rule:MF_00044};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB
Aspartate--tRNA ligase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=SYD_DECAR rbh
bjp_ig2103_scaffold_135_curated_21
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18310..18666
DNA (357bp) protein (119aa)
Guanine-specific ribonuclease N1 and T1 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IE1_DECAR
guanine-specific ribonuclease N1 and T1
Guanine-specific ribonuclease N1 and T1 {ECO:0000313|EMBL:AAZ45390.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_22
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18663..19106
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IE2_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ45389.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_23

Not on your lists

19103..19552
DNA (450bp) protein (150aa)
dATP pyrophosphohydrolase {ECO:0000313|EMBL:EKE17906.1}; EC=3.6.1.- {ECO:0000313|EMBL:EKE17906.1};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ntpA; dATP pyrophosphohydrolase; K08310 dATP pyrophosphohydrolase [EC:3.6.1.-]
dATP pyrophosphohydrolase n=1 Tax=uncultured bacterium RepID=K2EGX5_9BACT
bjp_ig2103_scaffold_135_curated_24
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19612..20028
DNA (417bp) protein (139aa)
Heat shock protein Hsp20 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IE4_DECAR
heat shock protein Hsp20; K13993 HSP20 family protein
Heat shock protein Hsp20 {ECO:0000313|EMBL:AAZ45387.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_25

Not on your lists

20112..20999
DNA (888bp) protein (296aa)
Acetylglutamate kinase {ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.- {ECO:0000256|SAAS:SAAS00277142};; EC=2.7.2.8 {ECO:0000256|SAAS:SAAS00245383};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] rbh
Acetylglutamate kinase n=1 Tax=uncultured bacterium RepID=K2G3X6_9BACT rbh
bjp_ig2103_scaffold_135_curated_26
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21004..21645
DNA (642bp) protein (214aa)
HAD-superfamily hydrolase subfamily IA, variant 3:Pyrimidine 5-nucleotidase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IE6_DECAR rbh
HAD family pyrimidine 5-nucleotidase; K07025 putative hydrolase of the HAD superfamily rbh
HAD-superfamily hydrolase subfamily IA, variant 3:Pyrimidine 5-nucleotidase {ECO:0000313|EMBL:AAZ45385.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_27
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21678..22286
DNA (609bp) protein (203aa)
Cell division inhibitor SlmA n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IE7_DECAR rbh
slmA; nucleoid occlusion protein; K05501 TetR/AcrR family transcriptional regulator rbh
Cell division inhibitor SlmA {ECO:0000313|EMBL:AAZ45384.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_28
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22335..23336)
DNA (1002bp) protein (334aa)
delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24] rbh
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IE8_DECAR rbh
bjp_ig2103_scaffold_135_curated_29
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23471..24133)
DNA (663bp) protein (221aa)
Probable GTP-binding protein EngB n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=ENGB_DECAR rbh
engB; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein rbh
Probable GTP-binding protein EngB {ECO:0000255|HAMAP-Rule:MF_00321}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_135_curated_30

Not on your lists

24242..24877
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2G3Y2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE17910.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cytochrome c, class I rbh
Displaying items 1-30 of 96 in total

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