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bjp_ig2103_scaffold_55_curated

Search features with annotation key words

Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_55_curated_1
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..797)
DNA (795bp) protein (265aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] rbh
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Adenosylhomocysteinase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JN6_DECAR rbh
bjp_ig2103_scaffold_55_curated_2
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1037..2200)
DNA (1164bp) protein (388aa)
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] rbh
S-adenosylmethionine synthase {ECO:0000255|HAMAP-Rule:MF_00086}; Short=AdoMet synthase {ECO:0000255|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000255|HAMAP-Rule:MF_00086};; MAT {ECO:0000255|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000255|HAMAP-Rule:MF_00086}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S-adenosylmethionine synthase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=METK_DECAR rbh
bjp_ig2103_scaffold_55_curated_3
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2361..3212
DNA (852bp) protein (284aa)
lipid A biosynthesis lauroyl acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] rbh
Lipid A biosynthesis acyltransferase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JN3_DECAR rbh
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:AAZ44948.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_55_curated_4

Not on your lists

3387..3890
DNA (504bp) protein (168aa)
GCN5-related N-acetyltransferase n=1 Tax=uncultured bacterium RepID=K2FJY4_9BACT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EKE18094.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
GCN5-related N-acetyltransferase
bjp_ig2103_scaffold_55_curated_5
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3950..4780
DNA (831bp) protein (277aa)
diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] rbh
Diaminopimelate epimerase {ECO:0000255|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000255|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00197};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Diaminopimelate epimerase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=DAPF_DECAR rbh
bjp_ig2103_scaffold_55_curated_6
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4777..5448
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JM9_DECAR rbh
hypothetical protein; K09921 hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ44952.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_55_curated_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5445..6341
DNA (897bp) protein (299aa)
Tyrosine recombinase XerC n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JM8_DECAR rbh
tyrosine recombinase XerC subunit; K03733 integrase/recombinase XerC rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_55_curated_8
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6425..6577
DNA (153bp) protein (51aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JM7_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ44954.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_55_curated_9
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6651..7844
DNA (1194bp) protein (398aa)
SAM-dependent methyltransferase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] rbh
SAM-dependent methyltransferase / 23S rRNA m(5)C-1962 methyltransferase {ECO:0000313|EMBL:AAZ44955.1}; EC=2.1.1.- {ECO:0000313|EMBL:AAZ44955.1};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SAM-dependent methyltransferase / 23S rRNA m(5)C-1962 methyltransferase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JM6_DECAR rbh
bjp_ig2103_scaffold_55_curated_10
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7898..8347
DNA (450bp) protein (150aa)
Fur family ferric uptake regulator n=1 Tax=Thauera phenylacetica B4P RepID=N6Z5C9_9RHOO
Fur family ferric uptake regulator {ECO:0000313|EMBL:ENO89633.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
Fe2+/Zn2+ uptake regulation protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
bjp_ig2103_scaffold_55_curated_11
unknown

Not on your lists

8344..8652
DNA (309bp) protein (103aa)

This feature has no annotations

bjp_ig2103_scaffold_55_curated_12
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8715..10130
DNA (1416bp) protein (472aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JM4_DECAR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ44957.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_55_curated_13
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10143..11039
DNA (897bp) protein (299aa)
Periplasmic solute binding protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JM3_DECAR rbh
periplasmic solute binding protein; K02077 zinc/manganese transport system substrate-binding protein rbh
Periplasmic solute binding protein {ECO:0000313|EMBL:AAZ44958.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_55_curated_14
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11036..11614
DNA (579bp) protein (193aa)
ABC transporter related protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JM2_DECAR
ABC transporter related
ABC transporter related protein {ECO:0000313|EMBL:AAZ44959.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_55_curated_15
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11604..12368
DNA (765bp) protein (255aa)
ABC-type Mn2+/Zn2+ transport systems permease components-like protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JM1_DECAR rbh
ABC-type Mn2+/Zn2+ transport systems permease components-like protein; K02075 zinc/manganese transport system permease protein rbh
ABC-type Mn2+/Zn2+ transport systems permease components-like protein {ECO:0000313|EMBL:AAZ44960.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_55_curated_16
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12414..13682
DNA (1269bp) protein (423aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JM0_DECAR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ44961.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_55_curated_17
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13697..14233
DNA (537bp) protein (179aa)
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] rbh
ATP-dependent protease subunit HslV {ECO:0000255|HAMAP-Rule:MF_00248}; EC=3.4.25.2 {ECO:0000255|HAMAP-Rule:MF_00248};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
ATP-dependent protease subunit HslV n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=HSLV_DECAR rbh
bjp_ig2103_scaffold_55_curated_18
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14230..15567
DNA (1338bp) protein (446aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=HSLU_DECAR rbh
hslU; ATP-dependent protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU rbh
ATP-dependent protease ATPase subunit HslU {ECO:0000255|HAMAP-Rule:MF_00249}; Unfoldase HslU {ECO:0000255|HAMAP-Rule:MF_00249}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_55_curated_19
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15650..16537
DNA (888bp) protein (296aa)
Auxin Efflux Carrier n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JL7_DECAR rbh
auxin efflux carrier; K07088 rbh
Auxin Efflux Carrier {ECO:0000313|EMBL:AAZ44964.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_55_curated_20
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16532..16900)
DNA (369bp) protein (123aa)
Heat shock protein Hsp15 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JL6_DECAR
RNA-binding S4; K04762 ribosome-associated heat shock protein Hsp15
Heat shock protein Hsp15 {ECO:0000313|EMBL:AAZ44965.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_55_curated_21
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16900..18159)
DNA (1260bp) protein (420aa)
diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] rbh
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Diaminopimelate decarboxylase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JL5_DECAR rbh
bjp_ig2103_scaffold_55_curated_22
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18357..18674
DNA (318bp) protein (106aa)
Protein CyaY n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=CYAY_DECAR
frataxin-like; K06202 CyaY protein
Protein CyaY {ECO:0000255|HAMAP-Rule:MF_00142}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_55_curated_23
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18675..20912)
DNA (2238bp) protein (746aa)
penicillin-binding protein 1A; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] rbh
Penicillin-binding protein 1A n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JL3_DECAR rbh
Penicillin-binding protein 1A {ECO:0000313|EMBL:AAZ44968.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_55_curated_24
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21143..22228
DNA (1086bp) protein (362aa)
Type IV pilus assembly protein PilM n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JL2_DECAR rbh
Type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM rbh
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:AAZ44969.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_55_curated_25
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22225..22794
DNA (570bp) protein (190aa)
Fimbrial assembly n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JL1_DECAR rbh
fimbrial assembly; K02663 type IV pilus assembly protein PilN rbh
Fimbrial assembly {ECO:0000313|EMBL:AAZ44970.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_55_curated_26

Not on your lists

22791..23456
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EE79_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE16846.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
pilus assembly protein, PilO; K02664 type IV pilus assembly protein PilO rbh
bjp_ig2103_scaffold_55_curated_27
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23453..23998
DNA (546bp) protein (182aa)
Pilus assembly protein, PilQ n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JK9_DECAR rbh
pilus assembly protein, PilQ; K02665 type IV pilus assembly protein PilP rbh
Pilus assembly protein, PilQ {ECO:0000313|EMBL:AAZ44972.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_55_curated_28
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23995..26121
DNA (2127bp) protein (709aa)
Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JK8_DECAR rbh
Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal {ECO:0000313|EMBL:AAZ44973.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
type II and III secretion system secretin; K02666 type IV pilus assembly protein PilQ rbh
bjp_ig2103_scaffold_55_curated_29
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26200..26727
DNA (528bp) protein (176aa)
aroK; shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase {ECO:0000255|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000255|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000255|HAMAP-Rule:MF_00109};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
shikimate kinase n=1 Tax=Dechloromonas aromatica RepID=UPI0001602578
bjp_ig2103_scaffold_55_curated_30

Not on your lists

26724..27809
DNA (1086bp) protein (362aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
aroB; 3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] rbh
3-dehydroquinate synthase n=1 Tax=uncultured bacterium RepID=K2F2A6_9BACT rbh
Displaying items 1-30 of 148 in total

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