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bjp_ig2103_scaffold_2042_curated

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_2042_curated_1
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..348)
DNA (348bp) protein (116aa)
Sporulation related protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47J70_DECAR
sporulation related
Sporulation related protein {ECO:0000313|EMBL:AAZ45111.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_2
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(357..887)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47J71_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ45110.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_3
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(897..2090)
DNA (1194bp) protein (398aa)
Membrane protein involved in aromatic hydrocarbon degradation n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47J72_DECAR rbh
aromatic hydrocarbon degradation protein; K06076 long-chain fatty acid transport protein rbh
Membrane protein involved in aromatic hydrocarbon degradation {ECO:0000313|EMBL:AAZ45109.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_4
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2136..2549)
DNA (414bp) protein (138aa)
thioesterase; K10806 acyl-CoA thioesterase YciA [EC:3.1.2.-]
Thioesterase superfamily n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47J73_DECAR
Thioesterase superfamily {ECO:0000313|EMBL:AAZ45108.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_5
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2639..4453
DNA (1815bp) protein (605aa)
ABC transporter, transmembrane region:ABC transporter related protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47J74_DECAR rbh
ABC transporter, transmembrane region:ABC transporter related; K06147 ATP-binding cassette, subfamily B, bacterial rbh
ABC transporter, transmembrane region:ABC transporter related protein {ECO:0000313|EMBL:AAZ45107.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_6

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4574..5479
DNA (906bp) protein (302aa)
Response regulator receiver n=1 Tax=uncultured bacterium RepID=K2FKL7_9BACT rbh
Response regulator receiver {ECO:0000313|EMBL:EKE18344.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains rbh
bjp_ig2103_scaffold_2042_curated_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5492..7033
DNA (1542bp) protein (514aa)
PAS protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47J75_DECAR rbh
PAS rbh
PAS protein {ECO:0000313|EMBL:AAZ45106.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_8
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7117..7515)
DNA (399bp) protein (133aa)
50S ribosomal protein L17 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RL17_DECAR
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
50S ribosomal protein L17 {ECO:0000255|HAMAP-Rule:MF_01368}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_9
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7573..8547)
DNA (975bp) protein (325aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RPOA_DECAR rbh
bjp_ig2103_scaffold_2042_curated_10
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8572..9201)
DNA (630bp) protein (210aa)
30S ribosomal protein S4 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RS4_DECAR rbh
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 rbh
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_11
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9214..9603)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RS11_DECAR
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
30S ribosomal protein S11 {ECO:0000255|HAMAP-Rule:MF_01310}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_12
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9616..9978)
DNA (363bp) protein (121aa)
30S ribosomal protein S13 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RS13_DECAR
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_13
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10030..10143)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RL36_DECAR
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
50S ribosomal protein L36 {ECO:0000255|HAMAP-Rule:MF_00251}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_14
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10217..10435)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 1 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=IF11_DECAR
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_15
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10442..11764)
DNA (1323bp) protein (441aa)
Protein translocase subunit SecY n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47J83_DECAR rbh
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_16
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11785..12219)
DNA (435bp) protein (145aa)
50S ribosomal protein L15 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RL15_DECAR
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
50S ribosomal protein L15 {ECO:0000255|HAMAP-Rule:MF_01341}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_17
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12223..12405)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RL30_DECAR
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
50S ribosomal protein L30 {ECO:0000255|HAMAP-Rule:MF_01371}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_18
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12409..12936)
DNA (528bp) protein (176aa)
30S ribosomal protein S5 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RS5_DECAR rbh
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 rbh
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_19
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12963..13319)
DNA (357bp) protein (119aa)
50S ribosomal protein L18 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RL18_DECAR
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_20
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13329..13859)
DNA (531bp) protein (177aa)
50S ribosomal protein L6 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RL6_DECAR rbh
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 rbh
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_21
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13871..14266)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RS8_DECAR
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_22

Not on your lists


comp(14281..14586)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=uncultured bacterium RepID=K2F751_9BACT
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
bjp_ig2103_scaffold_2042_curated_23
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14594..15133)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RL5_DECAR rbh
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 rbh
50S ribosomal protein L5 {ECO:0000255|HAMAP-Rule:MF_01333}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_24
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15143..15460)
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RL24_DECAR
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
50S ribosomal protein L24 {ECO:0000255|HAMAP-Rule:MF_01326}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_25
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15471..15839)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RL14_DECAR
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
50S ribosomal protein L14 {ECO:0000255|HAMAP-Rule:MF_01367}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_26
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15996..16262)
DNA (267bp) protein (89aa)
30S ribosomal protein S17 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RS17_DECAR
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
30S ribosomal protein S17 {ECO:0000255|HAMAP-Rule:MF_01345}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_27
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16259..16453)
DNA (195bp) protein (65aa)
50S ribosomal protein L29 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RL29_DECAR
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
50S ribosomal protein L29 {ECO:0000255|HAMAP-Rule:MF_00374}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_28

Not on your lists


comp(16456..16869)
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=uncultured bacterium RepID=K2F4E9_9BACT
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig2103_scaffold_2042_curated_29
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16870..17658)
DNA (789bp) protein (263aa)
30S ribosomal protein S3 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RS3_DECAR rbh
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 rbh
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_2042_curated_30
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17668..17997)
DNA (330bp) protein (110aa)
50S ribosomal protein L22 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RL22_DECAR
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
50S ribosomal protein L22 {ECO:0000255|HAMAP-Rule:MF_01331}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Displaying items 1-30 of 37 in total

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