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bjp_ig2103_scaffold_260_curated

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Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_260_curated_1
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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241..1371
DNA (1131bp) protein (377aa)
Methyltransferase small n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IQ5_DECAR rbh
methyltransferase small rbh
Methyltransferase small {ECO:0000313|EMBL:AAZ45276.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_260_curated_2
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1477..1848
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IQ4_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ45277.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_260_curated_3
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1964..3112)
DNA (1149bp) protein (383aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IQ0_DECAR rbh
extracellular ligand-binding receptor rbh
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:AAZ45281.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_260_curated_4
unknown

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comp(3181..3381)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000365C38B
bjp_ig2103_scaffold_260_curated_5
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3490..3741)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IP9_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ45282.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_260_curated_trna_1
unknown

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comp(3873..3946)
DNA (74bp)
transferRNA
bjp_ig2103_scaffold_260_curated_6
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3955..5928)
DNA (1974bp) protein (658aa)
RNA polymerase sigma factor RpoD n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IP8_DECAR rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor rbh
bjp_ig2103_scaffold_260_curated_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5975..7711)
DNA (1737bp) protein (579aa)
DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] rbh
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
DNA primase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IP7_DECAR rbh
bjp_ig2103_scaffold_260_curated_8
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7724..8170)
DNA (447bp) protein (149aa)
GatB/Yqey n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IP6_DECAR
hypothetical protein; K09117 hypothetical protein
GatB/Yqey {ECO:0000313|EMBL:AAZ45285.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_260_curated_9
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8252..8464)
DNA (213bp) protein (71aa)
30S ribosomal protein S21 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RS21_DECAR
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
30S ribosomal protein S21 {ECO:0000255|HAMAP-Rule:MF_00358}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_260_curated_10
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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8604..9638
DNA (1035bp) protein (345aa)
DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] rbh
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_01445}; EC=2.3.1.234 {ECO:0000255|HAMAP-Rule:MF_01445};; N6-L-threonylcarbamoyladenine synthase {ECO:0000255|HAMAP-Rule:MF_01445}; Short=t(6)A synthase {ECO:0000255|HAMAP-Rule:MF_01445};; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000255|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000255|HAMAP-Rule:MF_01445}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobac
tRNA N6-adenosine threonylcarbamoyltransferase n=2 Tax=Dechloromonas aromatica (strain RCB) RepID=TSAD_DECAR rbh
bjp_ig2103_scaffold_260_curated_11
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9659..10318)
DNA (660bp) protein (220aa)
acyl-phosphate glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] rbh
Glycerol-3-phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000255|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000255|HAMAP-Rule:MF_01043}; Short=GPAT {ECO:0000255|HAMAP-Rule:MF_01043};; EC=2.3.1.n3 {ECO:0000255|HAMAP-Rule:MF_01043};; Lysophosphatidic acid synthase {ECO:0000255|HAMAP-Rule:MF_01043}; Short=LPA synthase {ECO:0000255|HAMAP-Rule:MF_01043};; TaxID=159087 spec
Glycerol-3-phosphate acyltransferase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=PLSY_DECAR rbh
bjp_ig2103_scaffold_260_curated_12
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10330..10680
DNA (351bp) protein (117aa)
dihydroneopterin aldolase; K01633 dihydroneopterin aldolase [EC:4.1.2.25]
Dihydroneopterin aldolase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IP0_DECAR
Dihydroneopterin aldolase {ECO:0000313|EMBL:AAZ45291.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_260_curated_13
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10677..11552)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00037F3CDA
Putative divalent heavy-metal cations transporter {ECO:0000313|EMBL:EJE49968.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
zupT; putative zinc transporter ZupT; K07238 zinc transporter, ZIP family
bjp_ig2103_scaffold_260_curated_14
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11639..12127)
DNA (489bp) protein (163aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IN9_DECAR rbh
hypothetical protein rbh
bjp_ig2103_scaffold_260_curated_15
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12174..13082)
DNA (909bp) protein (303aa)
Tyrosine recombinase XerD n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IN7_DECAR rbh
tyrosine recombinase XerD subunit; K04763 integrase/recombinase XerD rbh
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_260_curated_16
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13060..13539)
DNA (480bp) protein (160aa)
methylated-DNA-(protein)-cysteine S-methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
Methylated-DNA-(Protein)-cysteine S-methyltransferase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IN6_DECAR
Methylated-DNA-(Protein)-cysteine S-methyltransferase {ECO:0000313|EMBL:AAZ45295.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_260_curated_17
unknown

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13701..14501
DNA (801bp) protein (267aa)
Family 3 extracellular solute-binding protein n=1 Tax=Thauera sp. 63 RepID=N6Y7I1_9RHOO rbh
family 3 extracellular solute-binding protein; K02030 polar amino acid transport system substrate-binding protein rbh
bjp_ig2103_scaffold_260_curated_18
unknown

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14577..15230
DNA (654bp) protein (218aa)
amino acid ABC transporter permease n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F35CF7 rbh
amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein rbh
bjp_ig2103_scaffold_260_curated_19
unknown

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15241..15993
DNA (753bp) protein (251aa)
ABC transporter; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] rbh
ABC transporter related n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMY5_ACCPU rbh
bjp_ig2103_scaffold_260_curated_20
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16015..17190)
DNA (1176bp) protein (392aa)
acyl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] rbh
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IN5_DECAR rbh
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal {ECO:0000313|EMBL:AAZ45296.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_260_curated_21
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17193..17645)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z3G9_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO89162.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
dcrH3; hypothetical protein; K07216 hemerythrin
bjp_ig2103_scaffold_260_curated_22
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17690..18946)
DNA (1257bp) protein (419aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] rbh
Gamma-glutamyl phosphate reductase {ECO:0000255|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000255|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000255|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00412}; Short=GSA dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00412};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas
Gamma-glutamyl phosphate reductase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=PROA_DECAR rbh
bjp_ig2103_scaffold_260_curated_23
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19060..19296
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IN3_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ45298.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_260_curated_24
unknown

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comp(19318..20223)
DNA (906bp) protein (302aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Thauera sp. 27 RepID=N6X7V0_9RHOO rbh
wspR2; two-component response regulator; K02488 two-component system, cell cycle response regulator rbh
bjp_ig2103_scaffold_260_curated_25
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20220..22838)
DNA (2619bp) protein (873aa)
barA; putative sensor-regulator protein (EC:2.7.13.1); K07678 two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
Putative sensor-regulator protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K864_AZOSB
bjp_ig2103_scaffold_260_curated_26
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22835..23371)
DNA (537bp) protein (179aa)
Conserved hypothetical secreted protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K863_AZOSB
hypothetical protein
Conserved hypothetical secreted protein {ECO:0000313|EMBL:CAL95018.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
bjp_ig2103_scaffold_260_curated_27
unknown

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comp(23379..25565)
DNA (2187bp) protein (729aa)
Putative TonB-dependent receptor protein n=1 Tax=Thauera sp. 28 RepID=N6ZFI4_9RHOO rbh
putative TonB-dependent receptor protein rbh
bjp_ig2103_scaffold_260_curated_28
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25601..26632)
DNA (1032bp) protein (344aa)
holA; DNA polymerase III subunit delta (EC:2.7.7.7); K02340 DNA polymerase III subunit delta [EC:2.7.7.7] rbh
DNA polymerase III, delta subunit {ECO:0000313|EMBL:AAZ45299.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AAZ45299.1};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
DNA polymerase III, delta subunit n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IN2_DECAR rbh
bjp_ig2103_scaffold_260_curated_29
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26632..27156)
DNA (525bp) protein (175aa)
Rare lipoprotein B n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IN1_DECAR
rare lipoprotein B; K03643 LPS-assembly lipoprotein
LPS-assembly lipoprotein LptE {ECO:0000256|HAMAP-Rule:MF_01186}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Displaying items 1-30 of 57 in total

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