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bjp_ig2103_scaffold_222_curated

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_222_curated_1
unknown

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1..1527
DNA (1527bp) protein (509aa)
Translation initiation factor IF-2 id=2427330 bin=GWF1_Spirochaetes_60_12 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
translation initiation factor IF-2; K02519 translation initiation factor IF-2 rbh
bjp_ig2103_scaffold_222_curated_2
unknown

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1508..1855
DNA (348bp) protein (116aa)
Ribosome-binding factor A id=2649729 bin=GWB1_Spirochaetes_59_5 species=Treponema sp. JC4 genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A
bjp_ig2103_scaffold_222_curated_3
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1852..2445
DNA (594bp) protein (198aa)
Outer membrane transport energization protein TonB n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H98_DECAR
TonB, C-terminal; K03832 periplasmic protein TonB
Outer membrane transport energization protein TonB {ECO:0000313|EMBL:AAZ45783.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_222_curated_4
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2442..4766
DNA (2325bp) protein (775aa)
TonB-dependent receptor n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H97_DECAR rbh
TonB-dependent receptor rbh
TonB-dependent receptor {ECO:0000313|EMBL:AAZ45784.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_222_curated_5
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4769..6115
DNA (1347bp) protein (449aa)
signal transduction histidine kinase, glucose-6-phosphate specific (EC:2.7.3.-); K07675 two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Signal transduction histidine kinase, glucose-6-phosphate specific n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H96_DECAR rbh
bjp_ig2103_scaffold_222_curated_6
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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6112..6759
DNA (648bp) protein (216aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H95_DECAR rbh
LuxR family transcriptional regulator; K07689 two-component system, NarL family, invasion response regulator UvrY rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AAZ45786.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_222_curated_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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6811..7701
DNA (891bp) protein (297aa)
peptidase S33, proline iminopeptidase 1; K01259 proline iminopeptidase [EC:3.4.11.5] rbh
Prolyl aminopeptidase, Serine peptidase, MEROPS family S33 {ECO:0000313|EMBL:AAZ45787.1}; EC=3.4.11.5 {ECO:0000313|EMBL:AAZ45787.1};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Prolyl aminopeptidase, Serine peptidase, MEROPS family S33 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H94_DECAR rbh
bjp_ig2103_scaffold_222_curated_8
unknown

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comp(7753..8295)
DNA (543bp) protein (181aa)

This feature has no annotations

bjp_ig2103_scaffold_222_curated_9
unknown

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comp(8592..9947)
DNA (1356bp) protein (452aa)

This feature has no annotations

bjp_ig2103_scaffold_222_curated_10
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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10152..12332
DNA (2181bp) protein (727aa)
TonB-dependent receptor:TonB box, N-terminal n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H81_DECAR rbh
TonB-dependent receptor:TonB box, N-terminal; K02014 iron complex outermembrane recepter protein rbh
TonB-dependent receptor:TonB box, N-terminal {ECO:0000313|EMBL:AAZ45800.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_222_curated_11
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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12665..13801
DNA (1137bp) protein (379aa)
Outer membrane porin protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K9X8_AZOSB rbh
outer membrane porin protein rbh
Outer membrane porin protein {ECO:0000313|EMBL:CAL95633.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
bjp_ig2103_scaffold_222_curated_12
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13910..14653)
DNA (744bp) protein (248aa)
Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H78_DECAR rbh
cyclic nucleotide-binding: regulatory protein, Crp; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein rbh
Cyclic nucleotide-binding:Bacterial regulatory protein, Crp {ECO:0000313|EMBL:AAZ45803.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_222_curated_13
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14739..16142
DNA (1404bp) protein (468aa)
coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] rbh
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Coproporphyrinogen-III oxidase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H77_DECAR rbh
bjp_ig2103_scaffold_222_curated_14
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16205..16864
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H76_DECAR rbh
hypothetical protein; K09792 hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ45805.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_222_curated_15
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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16878..19079
DNA (2202bp) protein (734aa)
ATPase, E1-E2 type:copper-translocating P-type ATPase:heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H74_DECAR rbh
ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AAZ45807.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_222_curated_16
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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19098..20855
DNA (1758bp) protein (586aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H73_DECAR rbh
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) rbh
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:AAZ45808.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_222_curated_17
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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20859..21065
DNA (207bp) protein (69aa)
Heavy metal transport/detoxification protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H72_DECAR
heavy metal transport/detoxification protein; K07213 copper chaperone
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:AAZ45809.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_222_curated_18
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21078..22142
DNA (1065bp) protein (355aa)
selenophosphate synthetase (EC:2.7.9.3); K01008 selenide, water dikinase [EC:2.7.9.3] rbh
Selenide, water dikinase {ECO:0000255|HAMAP-Rule:MF_00625}; EC=2.7.9.3 {ECO:0000255|HAMAP-Rule:MF_00625};; Selenium donor protein {ECO:0000255|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000255|HAMAP-Rule:MF_00625}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Selenide, water dikinase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=SELD_DECAR rbh
bjp_ig2103_scaffold_222_curated_19
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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22292..24673
DNA (2382bp) protein (794aa)
Tonb-dependent receptor n=1 Tax=Thauera sp. 27 RepID=N6Y7U9_9RHOO rbh
Tonb-dependent receptor {ECO:0000313|EMBL:ENO78507.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
tonb-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
bjp_ig2103_scaffold_222_curated_20
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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24712..25824
DNA (1113bp) protein (371aa)
(S)-2-hydroxy-acid oxidase (EC:1.1.3.15); K00104 glycolate oxidase [EC:1.1.3.15] rbh
(S)-2-hydroxy-acid oxidase n=1 Tax=Thauera sp. 63 RepID=N6X6U3_9RHOO rbh
(S)-2-hydroxy-acid oxidase {ECO:0000313|EMBL:ENO74840.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
bjp_ig2103_scaffold_222_curated_21
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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25837..26520
DNA (684bp) protein (228aa)
PKHD-type hydroxylase C664_18854 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
hydroxylase; K07336 PKHD-type hydroxylase [EC:1.14.11.-] rbh
PKHD-type hydroxylase C664_18854 n=1 Tax=Thauera sp. 63 RepID=N6WZP4_9RHOO rbh
bjp_ig2103_scaffold_222_curated_22
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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27008..28783
DNA (1776bp) protein (592aa)
asnB; asparagine synthetase (glutamine amidotransferase) protein (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] rbh
Asparagine synthetase n=1 Tax=Thauera sp. 63 RepID=N6XCM1_9RHOO rbh
Asparagine synthase {ECO:0000313|EMBL:ENO77165.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
bjp_ig2103_scaffold_222_curated_23
unknown

Not on your lists

28797..30557
DNA (1761bp) protein (587aa)
Acetyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT89_9BURK rbh
acetyltransferase rbh
bjp_ig2103_scaffold_222_curated_24
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30554..31843
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6Y431_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:ENO77167.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
hypothetical protein rbh
bjp_ig2103_scaffold_222_curated_25
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

31840..32286
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z291_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCQ92112.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
hypothetical protein
bjp_ig2103_scaffold_222_curated_26
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32363..32800)
DNA (438bp) protein (146aa)
4-oxalocrotonate tautomerase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q479E3_DECAR
4-oxalocrotonate tautomerase
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:AAZ48538.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_222_curated_27
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(32819..33583)
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q479E4_DECAR rbh
Short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AAZ48537.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_222_curated_28
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33595..34530)
DNA (936bp) protein (312aa)
glyoxalase/bleomycin resistance protein/dioxygenase; K00446 catechol 2,3-dioxygenase [EC:1.13.11.2] rbh
Catechol 2,3-dioxygenase {ECO:0000313|EMBL:AAZ48533.1}; EC=1.13.11.2 {ECO:0000313|EMBL:AAZ48533.1};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Catechol 2,3-dioxygenase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q479E8_DECAR rbh
bjp_ig2103_scaffold_222_curated_29
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34607..35407)
DNA (801bp) protein (267aa)
HpcH/HpaI aldolase; K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] rbh
2,4-dihydroxyhept-2-enedioate aldolase {ECO:0000313|EMBL:AAZ48532.1}; EC=4.1.2.- {ECO:0000313|EMBL:AAZ48532.1};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
2,4-dihydroxyhept-2-enedioate aldolase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q479E9_DECAR rbh
bjp_ig2103_scaffold_222_curated_30
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35646..36650)
DNA (1005bp) protein (335aa)
Transcriptional regulator, AraC family n=1 Tax=Thiocapsa marina 5811 RepID=F9UDH7_9GAMM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EGV17921.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
AraC family transcripiotnal regulator
Displaying items 1-30 of 64 in total

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