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bjp_ig2103_scaffold_44_curated

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Displaying items 1-30 of 164 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_44_curated_1
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3..941
DNA (939bp) protein (313aa)
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (EC:4.2.1.3); K01682 aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRNR036687}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Aconitate hydratase 2 n=2 Tax=Bacteria RepID=Q47C19_DECAR
bjp_ig2103_scaffold_44_curated_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

1093..1287
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=D8P9K7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK39916.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
bjp_ig2103_scaffold_44_curated_3
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1795..2958
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036AA3E7 rbh
Uncharacterized protein {ECO:0000313|EMBL:EJE51016.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
FAD dependent oxidoreductase rbh
bjp_ig2103_scaffold_44_curated_4
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3114..4310
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036E679E
major facilitator superfamily transporter
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence {ECO:0000313|EMBL:ABA78887.1}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM; 158).;"
bjp_ig2103_scaffold_44_curated_5

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4441..4881
DNA (441bp) protein (147aa)
RNA polymerase ECF(Extracytoplasmic function)-type sigma factor (Sigma-Z) (Modular protein) n=1 Tax=mine drainage metagenome RepID=E6QAG1_9ZZZZ
RNA polymerase ECF(Extracytoplasmic function)-type sigma factor (Sigma-Z) (Modular protein) {ECO:0000313|EMBL:CBI04187.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative sigma70-like protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
bjp_ig2103_scaffold_44_curated_6
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4936..5583
DNA (648bp) protein (216aa)
Oxidoreductase, putative n=1 Tax=Cellvibrio sp. BR RepID=I3I4L1_9GAMM rbh
Oxidoreductase, putative {ECO:0000313|EMBL:EIK42996.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
NAD(P)H dehydrogenase (quinone)
bjp_ig2103_scaffold_44_curated_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5797..6192
DNA (396bp) protein (132aa)
Rhodanese-like protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BTR2_9GAMM
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
Rhodanese domain-containing protein
bjp_ig2103_scaffold_44_curated_8
unknown

Not on your lists

comp(6202..6885)
DNA (684bp) protein (228aa)
Intracellular protease/amidase n=1 Tax=Streptomyces nanchangensis RepID=D6C451_9ACTO
ThiJ/PfpI domain-containing protein
bjp_ig2103_scaffold_44_curated_9
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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7026..7952
DNA (927bp) protein (309aa)
Probable transcriptional regulator, LysR family n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NSE4_CHRVO
LysR family transcriptional regulator
Probable transcriptional regulator, LysR family {ECO:0000313|EMBL:AAQ61143.1}; TaxID=243365 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /; NBRC 12614 / NCIMB 9131 / NCTC 9757).;"
bjp_ig2103_scaffold_44_curated_10
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8336..11098)
DNA (2763bp) protein (921aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00038297E7
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:BAO29551.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
PAS domain-containing protein rbh
bjp_ig2103_scaffold_44_curated_11
Marinomonas sp. MED121, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11216..12016)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Algicola sagamiensis RepID=UPI00036CF5AF
Putative ABC amino acid transporter solute binding protein {ECO:0000313|EMBL:EAQ63753.1}; TaxID=314277 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. MED121.;"
hypothetical protein
bjp_ig2103_scaffold_44_curated_12
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12173..12496
DNA (324bp) protein (108aa)
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (EC:4.2.1.3); K01682 aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRNR036687}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Aconitate hydratase 2 n=2 Tax=Bacteria RepID=Q47C19_DECAR
bjp_ig2103_scaffold_44_curated_13
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12570..12998
DNA (429bp) protein (143aa)
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (EC:4.2.1.3); K01682 aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRNR036687}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Aconitate hydratase 2 n=2 Tax=Bacteria RepID=Q47C19_DECAR
bjp_ig2103_scaffold_44_curated_14
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13110..13259
DNA (150bp) protein (50aa)
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (EC:4.2.1.3); K01682 aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRNR036687}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Aconitate hydratase 2 n=2 Tax=Bacteria RepID=Q47C19_DECAR
bjp_ig2103_scaffold_44_curated_15
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13423..14199)
DNA (777bp) protein (259aa)
Sel1 domain-containing protein repeat-containing protein n=1 Tax=Thauera aminoaromatica S2 RepID=N6XWZ5_9RHOO
Sel1 domain-containing protein repeat-containing protein {ECO:0000313|EMBL:ENO86316.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
Sel1 domain-containing protein repeat-containing protein
bjp_ig2103_scaffold_44_curated_16
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14787..15242)
DNA (456bp) protein (152aa)
CreA n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47ET0_DECAR
CreA; K05805 CreA protein
CreA {ECO:0000313|EMBL:AAZ46651.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_44_curated_17
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15239..15706)
DNA (468bp) protein (156aa)
UPF0178 protein Daro_2879 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Y2879_DECAR
hypothetical protein; K09768 hypothetical protein
UPF0178 protein Daro_2879 {ECO:0000255|HAMAP-Rule:MF_00489}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_44_curated_18
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15830..17101
DNA (1272bp) protein (424aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47C24_DECAR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ47607.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_44_curated_19
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17102..18088)
DNA (987bp) protein (329aa)
Beta-lactamase-like protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47C23_DECAR rbh
beta-lactamase rbh
Beta-lactamase-like protein {ECO:0000313|EMBL:AAZ47608.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_44_curated_20
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18525..18767
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q477R6_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ48915.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_44_curated_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18809..19360)
DNA (552bp) protein (184aa)
polyketide cyclase n=1 Tax=Variovorax paradoxus RepID=UPI00037EFCC0
Polyketide cyclase / dehydrase and lipid transport {ECO:0000313|EMBL:EJL75303.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
bjp_ig2103_scaffold_44_curated_22
unknown

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comp(19499..21175)
DNA (1677bp) protein (559aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000364A35D rbh
PAS/PAC sensor signal transduction histidine kinase rbh
bjp_ig2103_scaffold_44_curated_23

Not on your lists

comp(21172..22446)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2G0G8_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE16650.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
metal dependent phosphohydrolase rbh
bjp_ig2103_scaffold_44_curated_24
unknown

Not on your lists

comp(22744..24237)
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00035D6A5A rbh
Fe-S oxidoreductase rbh
bjp_ig2103_scaffold_44_curated_25
unknown

Not on your lists

comp(24427..24975)
DNA (549bp) protein (183aa)

This feature has no annotations

bjp_ig2103_scaffold_44_curated_26
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25119..25973)
DNA (855bp) protein (285aa)
psd; phosphatidylserine decarboxylase; K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] rbh
Phosphatidylserine decarboxylase proenzyme {ECO:0000255|HAMAP-Rule:MF_00662}; EC=4.1.1.65 {ECO:0000255|HAMAP-Rule:MF_00662};; Contains:; Phosphatidylserine decarboxylase alpha chain {ECO:0000255|HAMAP-Rule:MF_00662}; Contains:; Phosphatidylserine decarboxylase beta chain {ECO:0000255|HAMAP-Rule:MF_00662}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=PSD_DECAR rbh
bjp_ig2103_scaffold_44_curated_27
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26053..26421)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KA40_AZOSB
hypothetical protein; K06996
Uncharacterized protein {ECO:0000313|EMBL:CAL95696.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
bjp_ig2103_scaffold_44_curated_28
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26570..27268
DNA (699bp) protein (233aa)
Putative transcriptional regulator, deoR-family n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KA39_AZOSB rbh
DeoR family transcriptional regulator rbh
Putative transcriptional regulator, deoR-family {ECO:0000313|EMBL:CAL95695.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
bjp_ig2103_scaffold_44_curated_29
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27258..28265)
DNA (1008bp) protein (336aa)
SAM-dependent methyltransferase; K06970 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] rbh
Ribosomal RNA large subunit methyltransferase F {ECO:0000255|HAMAP-Rule:MF_01848}; EC=2.1.1.181 {ECO:0000255|HAMAP-Rule:MF_01848};; 23S rRNA mA1618 methyltransferase {ECO:0000255|HAMAP-Rule:MF_01848}; rRNA adenine N-6-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01848}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Ribosomal RNA large subunit methyltransferase F n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RLMF_DECAR rbh
bjp_ig2103_scaffold_44_curated_30
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28433..30133
DNA (1701bp) protein (567aa)
Conserved hypothetical ATPase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KC51_AZOSB rbh
ATPase rbh
Conserved hypothetical ATPase {ECO:0000313|EMBL:CAL96407.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
Displaying items 1-30 of 164 in total

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