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bjp_ig2103_scaffold_1724_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_1724_curated_trna_1
unknown

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5..77
DNA (73bp)
transferRNA
bjp_ig2103_scaffold_1724_curated_1

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105..458
DNA (354bp) protein (118aa)
Protein translocase subunit SecE n=1 Tax=uncultured bacterium RepID=K2F1V0_9BACT
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
secE; preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
bjp_ig2103_scaffold_1724_curated_2
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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455..988
DNA (534bp) protein (178aa)
Transcription termination/antitermination protein NusG n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JB5_DECAR rbh
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_1724_curated_3
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1096..1527
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RL11_DECAR
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_1724_curated_4
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1530..2225
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RL1_DECAR rbh
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 rbh
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_1724_curated_5
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2453..2950
DNA (498bp) protein (166aa)
50S ribosomal protein L10 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RL10_DECAR
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
50S ribosomal protein L10 {ECO:0000255|HAMAP-Rule:MF_00362}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_1724_curated_6

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2989..3357
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12 n=1 Tax=uncultured bacterium RepID=K2FKN5_9BACT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
bjp_ig2103_scaffold_1724_curated_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3565..7848
DNA (4284bp) protein (1428aa)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit beta n=2 Tax=Proteobacteria RepID=RPOB_DECAR rbh
bjp_ig2103_scaffold_1724_curated_8
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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7870..12081
DNA (4212bp) protein (1404aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit beta' n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RPOC_DECAR rbh
bjp_ig2103_scaffold_1724_curated_9
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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12238..12615
DNA (378bp) protein (126aa)
30S ribosomal protein S12 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNY3_AZOSU
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
bjp_ig2103_scaffold_1724_curated_10
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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12726..13196
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RS7_DECAR
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7
30S ribosomal protein S7 {ECO:0000255|HAMAP-Rule:MF_00480}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_1724_curated_11
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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13215..15308
DNA (2094bp) protein (698aa)
Elongation factor G n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNY1_AZOSU rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
translation elongation factor EF-G; K02355 elongation factor G rbh
bjp_ig2103_scaffold_1724_curated_12
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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15330..15428
DNA (99bp) protein (33aa)
elongation factor Tu (EC:2.7.7.4); K02358 elongation factor Tu
elongation factor Tu n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0EF4D
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
Displaying 13 items

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