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bjp_ig2103_scaffold_32_curated

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Displaying items 1-30 of 181 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_32_curated_1
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..508
DNA (507bp) protein (169aa)
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] rbh
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AN9_DECAR rbh
bjp_ig2103_scaffold_32_curated_2
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

581..1537
DNA (957bp) protein (319aa)
ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] rbh
Ornithine cyclodeaminase {ECO:0000313|EMBL:AAZ48090.1}; EC=4.3.1.12 {ECO:0000313|EMBL:AAZ48090.1};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Ornithine cyclodeaminase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AP1_DECAR rbh
bjp_ig2103_scaffold_32_curated_3
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1618..4152
DNA (2535bp) protein (845aa)
protein kinase family protein; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] rbh
Protein kinase family protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNJ9_AZOSU rbh
Protein kinase family protein {ECO:0000313|EMBL:AEV25844.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
bjp_ig2103_scaffold_32_curated_4
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4149..4970
DNA (822bp) protein (274aa)
protein phosphatase 2C; K01090 protein phosphatase [EC:3.1.3.16] rbh
Protein phosphatase 2C-like protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AP2_DECAR rbh
Protein phosphatase 2C-like protein {ECO:0000313|EMBL:AAZ48089.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_32_curated_5

Not on your lists

4986..5687
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FJZ3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE18104.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
forkhead-associated rbh
bjp_ig2103_scaffold_32_curated_6
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5716..7926
DNA (2211bp) protein (737aa)
putative transmembrane sensor domain protein; K01768 adenylate cyclase [EC:4.6.1.1] rbh
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037C07D9 rbh
Putative transmembrane sensor domain protein {ECO:0000313|EMBL:AEV25847.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
bjp_ig2103_scaffold_32_curated_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7929..8696
DNA (768bp) protein (256aa)
Beta-lactamase-like protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AP4_DECAR rbh
beta-lactamase rbh
Beta-lactamase-like protein {ECO:0000313|EMBL:AAZ48087.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_32_curated_8
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8698..9741
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000370FB68 rbh
Rhodanese-like protein,cyclic nucleotide-binding protein {ECO:0000313|EMBL:BAO30575.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Rhodanese-like protein,cyclic nucleotide-binding protein rbh
bjp_ig2103_scaffold_32_curated_9
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9753..11339
DNA (1587bp) protein (529aa)
GAF protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AP5_DECAR rbh
hypothetical protein rbh
GAF protein {ECO:0000313|EMBL:AAZ48086.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_32_curated_10
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11576..12010
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI0003768E5B
fimbrial protein pilin; K02650 type IV pilus assembly protein PilA
Fimbrial protein pilin {ECO:0000313|EMBL:ADJ29328.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
bjp_ig2103_scaffold_32_curated_11
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12264..14171
DNA (1908bp) protein (636aa)
Tfp pilus assembly protein PilF n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B6S5_9PROT rbh
Tfp pilus assembly protein PilF rbh
Tfp pilus assembly protein PilF {ECO:0000313|EMBL:BAN36197.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
bjp_ig2103_scaffold_32_curated_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14126..16174
DNA (2049bp) protein (683aa)
Lipopolysaccharide modification acyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCH6_9GAMM rbh
Lipopolysaccharide modification acyltransferase {ECO:0000313|EMBL:EIL97167.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
acyltransferase 3 rbh
bjp_ig2103_scaffold_32_curated_13
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16385..17206
DNA (822bp) protein (274aa)
Glycosyl transferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AD60_9PROT rbh
glycosyl transferase rbh
Glycosyl transferase {ECO:0000313|EMBL:BAN36198.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
bjp_ig2103_scaffold_32_curated_14
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17267..18373
DNA (1107bp) protein (369aa)
Glycosyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AN03_9PROT rbh
glycosyltransferase rbh
Glycosyltransferase {ECO:0000313|EMBL:BAN36199.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
bjp_ig2103_scaffold_32_curated_15
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18370..19272
DNA (903bp) protein (301aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZU21_DESOH
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABW66333.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus oleovorans (strain DSM 6200 / Hxd3).;"
bjp_ig2103_scaffold_32_curated_16
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19269..20285
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q2R3_9RHOO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAL22708.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
bjp_ig2103_scaffold_32_curated_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20278..21240)
DNA (963bp) protein (321aa)
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DS33_9PROT
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase {ECO:0000313|EMBL:CCU62195.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
glycosyl transferase family protein
bjp_ig2103_scaffold_32_curated_18

Not on your lists

comp(21233..23098)
DNA (1866bp) protein (622aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2CWA5_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD97305.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
glycosyl transferase family protein rbh
bjp_ig2103_scaffold_32_curated_19
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23116..24549)
DNA (1434bp) protein (478aa)
Glycosyl transferase, family 2 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAF2_NOVAD
glycosyl transferase
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABD25171.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
bjp_ig2103_scaffold_32_curated_20
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24984..26042)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00036082DA
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACB22376.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
bjp_ig2103_scaffold_32_curated_21
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(26118..26756)
DNA (639bp) protein (213aa)
Tetratricopeptide TPR_2 n=1 Tax=Arthrospira platensis C1 RepID=K1VZ23_ARTPT
Tetratricopeptide TPR_2 {ECO:0000313|EMBL:EKD09760.1}; TaxID=459495 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platensis C1.;"
TPR domain protein
bjp_ig2103_scaffold_32_curated_22
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26734..27384)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DLH1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJT02624.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
hypothetical protein
bjp_ig2103_scaffold_32_curated_23
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27398..28591)
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YA60_9DELT rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CBX27454.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
polysaccharide/polyol phosphate ABC transporter ATPase rbh
bjp_ig2103_scaffold_32_curated_24
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28607..29386)
DNA (780bp) protein (260aa)
ABC-type polysaccharide/polyol phosphate export systems, permease component n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y5D0_THIV6 rbh
ABC-type polysaccharide/polyol phosphate export systems permease rbh
ABC-type polysaccharide/polyol phosphate export systems, permease component {ECO:0000313|EMBL:AFL72198.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
bjp_ig2103_scaffold_32_curated_25
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29598..29720)
DNA (123bp) protein (41aa)
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
bjp_ig2103_scaffold_32_curated_26
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29748..30197)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZQ8_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI09456.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
bjp_ig2103_scaffold_32_curated_27
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30187..30777)
DNA (591bp) protein (197aa)
Predicted ARSR subfamily of helix-turn-helix bacterial transcription regulatory protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZQ9_AROAE rbh
ArsR family transcriptional regulator rbh
Predicted ARSR subfamily of helix-turn-helix bacterial transcription regulatory protein {ECO:0000313|EMBL:CAI09455.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
bjp_ig2103_scaffold_32_curated_28
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30888..31286)
DNA (399bp) protein (133aa)
Ribonuclease VapC n=1 Tax=Thiocapsa marina 5811 RepID=F9UBF2_9GAMM
PilT protein-like protein {ECO:0000313|EMBL:BAO28278.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
PilT protein domain-containing protein
bjp_ig2103_scaffold_32_curated_29
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(31286..31543)
DNA (258bp) protein (86aa)
Transcriptional regulator, AbrB family n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XSJ6_STAC7
transcriptional regulator, AbrB family
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:AFZ34642.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
bjp_ig2103_scaffold_32_curated_30
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31789..32178)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQM9_9GAMM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEM48668.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
Displaying items 1-30 of 181 in total

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