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bjp_ig2103_scaffold_79_curated_26

Organism: BJP_Ig2103_Hor_218_2014_Dechloromonas_63_51_curated

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(25837..26361)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 (EC:2.7.7.6); K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 174.0
  • Bit_score: 311
  • Evalue 1.40e-82
  • rbh
RNA polymerase, sigma-24 subunit, RpoE n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BH5_DECAR similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 174.0
  • Bit_score: 311
  • Evalue 4.50e-82
  • rbh
RNA polymerase, sigma-24 subunit, RpoE {ECO:0000313|EMBL:AAZ47806.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 174.0
  • Bit_score: 311
  • Evalue 9.20e-82

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Taxonomy

Dechloromonas aromatica → Dechloromonas → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
GTGGAGCGTCGCGCCTTCAAACAGGCGATGTATGCCGTTCACGAGGAAGAAGCGGCGCTCGACATCGTCCAGGATTCGATGATGAAACTGGCAGAGAAATACGGCGATCGACCGGAAGAGGAGTTTCCCATGCTCTTCCAGCGCATCCTGCAGAACACCATTCGCGACTTCTACCGGCGGAGCAAGGTGCGTTCGATGTGGACGACATTGCTCTCGGCTTTCTCCTCCGACGATGACGAGGACTACGACCCGCTGGAAACACTGACCGTAGACAGCAACGACGGCGGCCCACGAACGCCGGAAAGCCAGCTACTGCAAGCACAAACCCTCAACATCATTGACGACGAAATAAAAAAACTGCCGGCACGTCAACGCGAAGCCTTCCTGATGCGTTACTGGGAGGACATGGACGTCGCCGAAACGGCTGCGACGATGGGCTGCTCGGAAGGCAGCGTCAAGACCCATTGTTCGCGTGCCACCCACACACTGGCAGCTGCACTTTCGGCCAAAGGTATCAAGTTATGA
PROTEIN sequence
Length: 175
VERRAFKQAMYAVHEEEAALDIVQDSMMKLAEKYGDRPEEEFPMLFQRILQNTIRDFYRRSKVRSMWTTLLSAFSSDDDEDYDPLETLTVDSNDGGPRTPESQLLQAQTLNIIDDEIKKLPARQREAFLMRYWEDMDVAETAATMGCSEGSVKTHCSRATHTLAAALSAKGIKL*