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bjp_ig2103_scaffold_79_curated

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Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_79_curated_1
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..281)
DNA (279bp) protein (93aa)
malate synthase (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9]
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Malate synthase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BF0_DECAR
bjp_ig2103_scaffold_79_curated_2
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

395..1297
DNA (903bp) protein (301aa)
Transcriptional regulator, LysR family n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BF1_DECAR rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AAZ47830.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_3
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1294..1647
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SBF8_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH47972.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
bjp_ig2103_scaffold_79_curated_4
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1660..4914)
DNA (3255bp) protein (1085aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BF2_DECAR rbh
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) rbh
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:AAZ47829.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_5
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4932..6230)
DNA (1299bp) protein (433aa)
isocitrate lyase (EC:4.1.3.1); K01637 isocitrate lyase [EC:4.1.3.1] rbh
Isocitrate lyase {ECO:0000313|EMBL:AAZ47828.1}; EC=4.1.3.1 {ECO:0000313|EMBL:AAZ47828.1};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Isocitrate lyase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BF3_DECAR rbh
bjp_ig2103_scaffold_79_curated_6
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6555..8351
DNA (1797bp) protein (599aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BF4_DECAR rbh
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AAZ47827.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8385..8876)
DNA (492bp) protein (164aa)
Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase; Short=HMG aldolase;; EC=4.1.3.17;; Oxaloacetate decarboxylase; Short=OAA decarboxylase;; EC=4.1.1.3;; Regulator of ribonuclease activity homolog; RraA-like protein; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Putative regulator of ribonuclease activity n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RRAAH_DECAR
ribonuclease activity regulator protein RraA; K02553 regulator of ribonuclease activity A
bjp_ig2103_scaffold_79_curated_8
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8942..11200)
DNA (2259bp) protein (753aa)
AAA ATPase, central region:Clp, N terminal n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BF6_DECAR rbh
ATPase AAA; K03694 ATP-dependent Clp protease ATP-binding subunit ClpA rbh
AAA ATPase, central region:Clp, N terminal {ECO:0000313|EMBL:AAZ47825.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_9
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11200..11442)
DNA (243bp) protein (81aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=CLPS_DECAR
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000255|HAMAP-Rule:MF_00302}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_10
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11768..11986
DNA (219bp) protein (73aa)
Cold-shock DNA-binding protein family n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BF8_DECAR
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family)
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:AAZ47823.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_11
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12056..12367)
DNA (312bp) protein (104aa)
Sulfur compound chelating protein SoxZ n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BF9_DECAR
sulfur compound chelating protein SoxZ
Sulfur compound chelating protein SoxZ {ECO:0000313|EMBL:AAZ47822.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_12
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12370..12861)
DNA (492bp) protein (164aa)
Conserved hypothetical transmembrane protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BG0_DECAR
hypothetical protein
Conserved hypothetical transmembrane protein {ECO:0000313|EMBL:AAZ47821.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_13
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12858..13292)
DNA (435bp) protein (145aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BG1_DECAR
moaC; molybdenum cofactor biosynthesis protein MoaC; K03637 molybdenum cofactor biosynthesis protein C
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_14
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13317..14855
DNA (1539bp) protein (513aa)
Peptidase M48, Ste24p n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BG2_DECAR rbh
peptidase M48, Ste24p rbh
Peptidase M48, Ste24p {ECO:0000313|EMBL:AAZ47819.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_15
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14896..15123
DNA (228bp) protein (76aa)
SirA-like; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
SirA-like protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BG3_DECAR
SirA-like protein {ECO:0000313|EMBL:AAZ47818.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_16
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15132..16868
DNA (1737bp) protein (579aa)
Para-aminobenzoate synthase, component I; K03342 para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] rbh
Para-aminobenzoate synthase, component I n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BG4_DECAR rbh
Para-aminobenzoate synthase, component I {ECO:0000313|EMBL:AAZ47817.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_17
unknown

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comp(16893..19832)
DNA (2940bp) protein (980aa)
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] rbh
Valine--tRNA ligase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YVY6_9RHOO rbh
bjp_ig2103_scaffold_79_curated_18
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19898..20356)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BG7_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ47814.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_19
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20365..20790)
DNA (426bp) protein (142aa)
DNA polymerase III subunit chi; K02339 DNA polymerase III subunit chi [EC:2.7.7.7]
DNA polymerase III chi subunit, HolC n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BG8_DECAR
DNA polymerase III chi subunit, HolC {ECO:0000313|EMBL:AAZ47813.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_20
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20787..22283)
DNA (1497bp) protein (499aa)
leucyl aminopeptidase; K01255 leucyl aminopeptidase [EC:3.4.11.1] rbh
Probable cytosol aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; EC=3.4.11.1 {ECO:0000255|HAMAP-Rule:MF_00181};; Leucine aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; Short=LAP {ECO:0000255|HAMAP-Rule:MF_00181};; EC=3.4.11.10 {ECO:0000255|HAMAP-Rule:MF_00181};; Leucyl aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Probable cytosol aminopeptidase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=AMPA_DECAR rbh
bjp_ig2103_scaffold_79_curated_21
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22355..23437
DNA (1083bp) protein (361aa)
Permease YjgP/YjgQ n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BH0_DECAR rbh
permease YjgP/YjgQ; K07091 lipopolysaccharide export system permease protein rbh
Permease YjgP/YjgQ {ECO:0000313|EMBL:AAZ47811.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_22

Not on your lists

23437..24522
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FKR2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE18384.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
permease YjgP/YjgQ; K11720 lipopolysaccharide export system permease protein rbh
bjp_ig2103_scaffold_79_curated_23

Not on your lists

comp(24523..24939)
DNA (417bp) protein (139aa)
Rdd n=1 Tax=uncultured bacterium RepID=K2G5C0_9BACT
Rdd {ECO:0000313|EMBL:EKE18385.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RDD
bjp_ig2103_scaffold_79_curated_24
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24936..25475)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BH3_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ47808.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_25
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25445..25840)
DNA (396bp) protein (132aa)
Probable transmembrane protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BH4_DECAR
transmembrane protein
Probable transmembrane protein {ECO:0000313|EMBL:AAZ47807.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_26
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25837..26361)
DNA (525bp) protein (175aa)
RNA polymerase factor sigma-70 (EC:2.7.7.6); K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
RNA polymerase, sigma-24 subunit, RpoE n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BH5_DECAR rbh
RNA polymerase, sigma-24 subunit, RpoE {ECO:0000313|EMBL:AAZ47806.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_79_curated_27
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26520..28217
DNA (1698bp) protein (566aa)
acetolactate synthase, large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
Acetolactate synthase, large subunit {ECO:0000313|EMBL:AAZ47805.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AAZ47805.1};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Acetolactate synthase, large subunit n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BH6_DECAR rbh
bjp_ig2103_scaffold_79_curated_28
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28236..28727
DNA (492bp) protein (164aa)
ilvH; acetolactate synthase 3 regulatory subunit (EC:2.2.1.6); K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6]
Acetolactate synthase, small subunit {ECO:0000313|EMBL:AAZ47804.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AAZ47804.1};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Acetolactate synthase, small subunit n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BH7_DECAR
bjp_ig2103_scaffold_79_curated_29
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28756..29772
DNA (1017bp) protein (339aa)
ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86] rbh
Ketol-acid reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000255|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000255|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Ketol-acid reductoisomerase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=ILVC_DECAR rbh
bjp_ig2103_scaffold_79_curated_30
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29912..30664
DNA (753bp) protein (251aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase [EC:2.7.8.8] rbh
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:AAZ47802.1}; EC=2.7.8.8 {ECO:0000313|EMBL:AAZ47802.1};; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BH9_DECAR rbh
Displaying items 1-30 of 133 in total

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