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bjp_ig2103_scaffold_23_curated

Search features with annotation key words

Displaying items 1-30 of 221 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_23_curated_1
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(810..1025)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KC96_METBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ35911.1}; TaxID=1201294 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 /; MS2) (Methanogenium bourgense).;"
bjp_ig2103_scaffold_23_curated_2
unknown

Not on your lists

comp(1183..1470)
DNA (288bp) protein (96aa)

This feature has no annotations

bjp_ig2103_scaffold_23_curated_3
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1427..2284)
DNA (858bp) protein (286aa)
Alpha/beta hydrolase fold protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GGZ5_METPE rbh
alpha/beta hydrolase fold protein rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ACL16400.1}; Flags: Precursor;; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;"
bjp_ig2103_scaffold_23_curated_4
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3243..3983)
DNA (741bp) protein (247aa)
MIP family channel protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJ10_METFS rbh
MIP family channel protein rbh
MIP family channel protein {ECO:0000313|EMBL:AGB03761.1}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_23_curated_5
unknown

Not on your lists

comp(3983..4195)
DNA (213bp) protein (71aa)
Uncharacterized conserved protein UCP037465, zinc finger protein, AF1427 n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D240_METSW
hypothetical protein
bjp_ig2103_scaffold_23_curated_6
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4224..5723)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HKB8_METFS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB03763.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_23_curated_7
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5857..7038)
DNA (1182bp) protein (394aa)
Bifunctional enzyme Fae/Hps n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HGC6_METFS rbh
formaldehyde-activating enzyme rbh
Bifunctional enzyme Fae/Hps {ECO:0000256|HAMAP-Rule:MF_01268}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_23_curated_8
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7225..8016)
DNA (792bp) protein (264aa)
Phenazine biosynthesis protein PhzF family n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEB0_METFS rbh
phenazine biosynthesis protein PhzF family rbh
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:AGB03072.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_23_curated_9
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8719..9621
DNA (903bp) protein (301aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FHM3_9EURY
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:EJG07535.1}; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" source="Methanofollis liminatans DSM 4140.;"
multi-sensor signal transduction histidine kinase
bjp_ig2103_scaffold_23_curated_10
unknown

Not on your lists

comp(9687..9917)
DNA (231bp) protein (77aa)

This feature has no annotations

bjp_ig2103_scaffold_23_curated_11
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10001..11701
DNA (1701bp) protein (567aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HID2_METFS rbh
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II rbh
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:AGB03073.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_23_curated_12
unknown

Not on your lists

11754..12026
DNA (273bp) protein (91aa)

This feature has no annotations

bjp_ig2103_scaffold_23_curated_13
unknown

Not on your lists

comp(12634..12831)
DNA (198bp) protein (66aa)

This feature has no annotations

bjp_ig2103_scaffold_23_curated_14
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12944..14338)
DNA (1395bp) protein (465aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GE00_METPE
PAS/PAC sensor signal transduction histidine kinase
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:ACL17501.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;"
bjp_ig2103_scaffold_23_curated_15
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14421..14651)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEB5_METFS
Protein of unknown function (DUF3006)
Uncharacterized protein {ECO:0000313|EMBL:AGB03077.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_23_curated_16
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14658..16067)
DNA (1410bp) protein (470aa)
Putative hydrolase (Metallo-beta-lactamase superfamily) n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HIE0_METFS rbh
putative hydrolase (metallo-beta-lactamase superfamily) rbh
Putative hydrolase (Metallo-beta-lactamase superfamily) {ECO:0000313|EMBL:AGB03078.1}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_23_curated_17
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16075..17391)
DNA (1317bp) protein (439aa)
5'-deoxyadenosine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=5'-dA deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.41 {ECO:0000256|HAMAP-Rule:MF_01281};; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJ15_METFS rbh
cytosine deaminase-like metal-dependent hydrolase rbh
bjp_ig2103_scaffold_23_curated_18
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17406..18077)
DNA (672bp) protein (224aa)
Purine nucleoside phosphorylase n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HGD8_METFS rbh
purine nucleoside phosphorylase rbh
Purine nucleoside phosphorylase {ECO:0000313|EMBL:AGB03080.1}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_23_curated_19
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18251..19375
DNA (1125bp) protein (375aa)
quinolinate phosphoribosyl transferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] rbh
Quinolinate phosphoribosyl transferase n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I6C3_METB6 rbh
Quinolinate phosphoribosyl transferase {ECO:0000313|EMBL:ABS55284.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
bjp_ig2103_scaffold_23_curated_20
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19473..20615
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HIV2_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB03024.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_23_curated_21
unknown

Not on your lists

comp(20618..20950)
DNA (333bp) protein (111aa)

This feature has no annotations

bjp_ig2103_scaffold_23_curated_22
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21344..22324
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HIV2_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB03024.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_23_curated_23
unknown

Not on your lists

22430..22906
DNA (477bp) protein (159aa)

This feature has no annotations

bjp_ig2103_scaffold_23_curated_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(23549..24754)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJE5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59258.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
bjp_ig2103_scaffold_23_curated_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(24944..26149)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJE5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59258.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
bjp_ig2103_scaffold_23_curated_26
unknown

Not on your lists

comp(26220..26891)
DNA (672bp) protein (224aa)

This feature has no annotations

bjp_ig2103_scaffold_23_curated_27
unknown

Not on your lists

comp(27151..27861)
DNA (711bp) protein (237aa)

This feature has no annotations

bjp_ig2103_scaffold_23_curated_28
unknown

Not on your lists

comp(28220..28390)
DNA (171bp) protein (57aa)

This feature has no annotations

bjp_ig2103_scaffold_23_curated_29
unknown

Not on your lists

28508..28741
DNA (234bp) protein (78aa)

This feature has no annotations

bjp_ig2103_scaffold_23_curated_30
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(28775..29797)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJE5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59258.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying items 1-30 of 221 in total

View Taxonomy