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RifSed_csp1_19ft_2_scaffold_30195

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_30195_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..260)
DNA (258bp) protein (86aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MAI8_9EURY
orotidine 5'-phosphate decarboxylase
RifSed_csp1_19ft_2_scaffold_30195_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(247..1173)
DNA (927bp) protein (309aa)
Probable deoxyhypusine synthase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLU3_METZD rbh
deoxyhypusine synthase rbh
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_30195_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1181..2548)
DNA (1368bp) protein (456aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZH7_METMA rbh
UDP-N-acetylmuramyl pentapeptide synthase {ECO:0000313|EMBL:KCZ71123.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_19ft_2_scaffold_30195_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2548..2952)
DNA (405bp) protein (135aa)
Sirohydrochlorin cobaltochelatase {ECO:0000256|HAMAP-Rule:MF_00785}; EC=4.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00785};; CbiXS {ECO:0000256|HAMAP-Rule:MF_00785}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Sirohydrochlorin cobaltochelatase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8C7_METEZ
cobalamin (vitamin B12) biosynthesis protein CbiX
RifSed_csp1_19ft_2_scaffold_30195_5
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3148..3930
DNA (783bp) protein (261aa)
UPI0003D1AA9B related cluster n=1 Tax=unknown RepID=UPI0003D1AA9B
Uncharacterized protein {ECO:0000313|EMBL:ETA66736.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_30195_6
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3940..4302
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KVE7_METHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB49111.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
RifSed_csp1_19ft_2_scaffold_30195_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4460..4588
DNA (129bp) protein (43aa)
Flagellin n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZK4_METBU
flagellin
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 7 items

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