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RifSed_csp1_16ft_2_scaffold_15972

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_2_scaffold_15972_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2..856)
DNA (855bp) protein (285aa)
ADP-ribosylglycohydrolase superfamily Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WPW2_METH6
ADP-ribosylglycohydrolase {ECO:0000313|EMBL:KCZ72391.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ADP-ribosylglycohydrolase superfamily
RifSed_csp1_16ft_2_scaffold_15972_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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940..1308
DNA (369bp) protein (123aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_16ft_2_scaffold_15972_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1313..1696)
DNA (384bp) protein (128aa)
FeS cluster assembly scaffold protein NifU Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKC5_METZD
FeS cluster assembly scaffold protein NifU {ECO:0000313|EMBL:KCZ70327.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
FeS cluster assembly scaffold protein NifU
RifSed_csp1_16ft_2_scaffold_15972_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1700..2854)
DNA (1155bp) protein (385aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cysteine desulfurase (EC:2.8.1.7)
Probable cysteine desulfurase Tax=Methanobacterium formicicum DSM 3637 RepID=K2R9Q3_METFO
RifSed_csp1_16ft_2_scaffold_15972_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2967..3692
DNA (726bp) protein (242aa)
30S ribosomal protein S13 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I732_METCZ
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rps13p; 30S ribosomal protein S13
RifSed_csp1_16ft_2_scaffold_15972_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3692..4285
DNA (594bp) protein (198aa)
30S ribosomal protein S4 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMN7_METZD
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S4
RifSed_csp1_16ft_2_scaffold_15972_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4288..4668
DNA (381bp) protein (127aa)
30S ribosomal protein S11 Tax=Methanosarcina mazei RepID=RS11_METMA
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rps11p; 30S ribosomal protein S11
RifSed_csp1_16ft_2_scaffold_15972_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4671..5456
DNA (786bp) protein (262aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
UPI0003D1C798 related cluster Tax=unknown RepID=UPI0003D1C798
RifSed_csp1_16ft_2_scaffold_15972_trna_1
unknown

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5472..5556
DNA (85bp)
transferRNA Leu
RifSed_csp1_16ft_2_scaffold_15972_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5646..5900)
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=Ferroplasma sp. Type II RepID=T0NH92_9EURY
RelE protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_16ft_2_scaffold_15972_10
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(5897..6088)
DNA (192bp) protein (64aa)
Uncharacterized protein Tax=Ferroplasma sp. Type II RepID=T0M7E8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB72914.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
hypothetical protein
Displaying 11 items

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