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RifSed_csp1_16ft_2_scaffold_41874

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_2_scaffold_41874_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3..203
DNA (201bp) protein (67aa)
50S ribosomal protein L29P Tax=Methanohalophilus portucalensis RepID=A5JHC9_9EURY
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
50S ribosomal protein L29P
RifSed_csp1_16ft_2_scaffold_41874_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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200..511
DNA (312bp) protein (104aa)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|HAMAP-Rule:MF_00754}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Ribonuclease P, Rpp29 (EC:3.1.26.5)
ribonuclease P Tax=Methanothermococcus thermolithotrophicus RepID=UPI000370F9E6
RifSed_csp1_16ft_2_scaffold_41874_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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526..849
DNA (324bp) protein (108aa)
30S ribosomal protein S17P Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZV4_METCG
Archaeal ribosomal protein S17P {ECO:0000313|EMBL:KCZ73299.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rpsQ; 30S ribosomal protein S17
RifSed_csp1_16ft_2_scaffold_41874_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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846..1244
DNA (399bp) protein (133aa)
50S ribosomal protein L14 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZV3_METCG
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rplN; 50S ribosomal protein L14b/L23e
RifSed_csp1_16ft_2_scaffold_41874_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1254..1595
DNA (342bp) protein (114aa)
50S ribosomal protein L24P Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=RL24_METBF
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LSU ribosomal protein L24P
RifSed_csp1_16ft_2_scaffold_41874_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1596..2699
DNA (1104bp) protein (368aa)
50S ribosomal protein L5 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E6R4_METMS
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
50S ribosomal protein L5P
RifSed_csp1_16ft_2_scaffold_41874_7
unknown

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2737..2856
DNA (120bp) protein (40aa)

This feature has no annotations

RifSed_csp1_16ft_2_scaffold_41874_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2862..3251
DNA (390bp) protein (130aa)
30S ribosomal protein S8 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E6R2_METMS
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S8P
RifSed_csp1_16ft_2_scaffold_41874_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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3261..3791
DNA (531bp) protein (177aa)
UPI0003D1C1F2 related cluster Tax=unknown RepID=UPI0003D1C1F2
50S ribosomal protein L6P
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_2_scaffold_41874_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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3797..4399
DNA (603bp) protein (201aa)
50S ribosomal protein L32e Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9WFD1_9EURY
ribosomal protein L32E
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_2_scaffold_41874_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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4401..4853
DNA (453bp) protein (151aa)
50S ribosomal protein L19e Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E6Q9_METMS
50S ribosomal protein L19E
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_2_scaffold_41874_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4856..5374
DNA (519bp) protein (173aa)
50S ribosomal protein L18P Tax=uncultured archaeon GZfos37B2 RepID=Q648R3_9ARCH
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
50S ribosomal protein L18
RifSed_csp1_16ft_2_scaffold_41874_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5380..6000
DNA (621bp) protein (207aa)
30S ribosomal protein S5 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RS5_METBU
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rps5p; 30S ribosomal protein S5P
RifSed_csp1_16ft_2_scaffold_41874_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6001..6462
DNA (462bp) protein (154aa)
50S ribosomal protein L30P Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0U2_METPS
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LSU ribosomal protein L7e (L30p)
RifSed_csp1_16ft_2_scaffold_41874_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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6468..6926
DNA (459bp) protein (153aa)
50S ribosomal protein L15P Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=RL15_METAC
rpl15p; 50S ribosomal protein L15
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_2_scaffold_41874_16
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6932..7753
DNA (822bp) protein (274aa)
Protein translocase subunit SecY Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYI6_METHD
preprotein translocase, SecY subunit
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 16 items

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