ggKbase home page

RifSed_csp1_16ft_2_scaffold_55519

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_2_scaffold_55519_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1..222)
DNA (222bp) protein (74aa)
NMD protein affecting ribosome stability and mRNA decay Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KVR6_METHD
NMD protein affecting ribosome stability and mRNA decay {ECO:0000313|EMBL:KCZ73369.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
NMD protein affecting ribosome stability and mRNA decay
RifSed_csp1_16ft_2_scaffold_55519_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(222..1163)
DNA (942bp) protein (314aa)
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:KCZ73368.1}; EC=5.1.3.2 {ECO:0000313|EMBL:KCZ73368.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UDP-glucose 4-epimerase (EC:5.1.3.2)
dTDP-glucose 4,6-dehydratase Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46GG5_METBF
RifSed_csp1_16ft_2_scaffold_55519_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

1247..2008
DNA (762bp) protein (254aa)
methyltransferase, partial Tax=Xanthomonas sacchari RepID=UPI000262AD8F
ubiquinone biosynthesis protein UbiE
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_2_scaffold_55519_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2095..3090
DNA (996bp) protein (332aa)
Arginine decarboxylase {ECO:0000256|RuleBase:RU003740}; EC=4.1.1.19 {ECO:0000256|RuleBase:RU003740};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
arginine decarboxylase (EC:4.1.1.19)
Arginine decarboxylase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJD0_CHLTF
Displaying 4 items

View Taxonomy