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RifSed_csp1_16ft_2_scaffold_65813

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_2_scaffold_65813_1

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3..167
DNA (165bp) protein (55aa)
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8THJ3_METAC
Uncharacterized protein {ECO:0000313|EMBL:KKM71202.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
RifSed_csp1_16ft_2_scaffold_65813_2
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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173..496
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TLU1_METAC
NifB-domain protein, type 2
NifB-domain protein, type 2 {ECO:0000313|EMBL:AKB43685.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
RifSed_csp1_16ft_2_scaffold_65813_3
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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510..818
DNA (309bp) protein (103aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KLD5_9FIRM
DnaJ-class molecular chaperone with C-terminal Zn finger domain
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:AGL03474.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
RifSed_csp1_16ft_2_scaffold_65813_4

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860..1366
DNA (507bp) protein (169aa)
Putative uncharacterized protein Tax=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) RepID=A7EEE6_SCLS1
Uncharacterized protein {ECO:0000313|EMBL:KKM89074.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
RifSed_csp1_16ft_2_scaffold_65813_5
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1413..2273
DNA (861bp) protein (287aa)
Uncharacterized protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMU1_METZD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH59958.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5); (Methanohalophilus zhilinae).;"
RifSed_csp1_16ft_2_scaffold_65813_6
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2293..2574)
DNA (282bp) protein (94aa)
Transcriptional regulator, HxlR family Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E7S3_METEZ
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ADI74146.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
RifSed_csp1_16ft_2_scaffold_65813_7
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

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2885..3331
DNA (447bp) protein (149aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWC1_HALNC
hypothetical protein
Tax=RBG_16_Spirochaetes_49_21_curated
RifSed_csp1_16ft_2_scaffold_65813_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3413..4483
DNA (1071bp) protein (357aa)
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase {ECO:0000256|HAMAP-Rule:MF_01163}; EC=6.3.4.23 {ECO:0000256|HAMAP-Rule:MF_01163};; 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate--formate ligase {ECO:0000256|HAMAP-Rule:MF_01163}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMU5_METZD
IMP biosynthesis enzyme PurP domain-containing protein
RifSed_csp1_16ft_2_scaffold_65813_9
unknown

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4480..4596
DNA (117bp) protein (39aa)

This feature has no annotations

RifSed_csp1_16ft_2_scaffold_65813_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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4547..4954
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468E6_METBF
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 10 items

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