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RifSed_csp2_16ft_3_scaffold_12849

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_12849_1
unknown

Not on your lists

comp(2..172)
DNA (171bp) protein (57aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_12849_2
unknown

Not on your lists

245..1048
DNA (804bp) protein (268aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_12849_3
unknown

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1114..1680
DNA (567bp) protein (189aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_12849_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1768..2970)
DNA (1203bp) protein (401aa)
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:KCZ72571.1}; EC=4.1.2.43 {ECO:0000313|EMBL:KCZ72571.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Bifunctional hexulose-6-phosphate synthase/ribonuclease regulator Tax=Methanolobus psychrophilus R15 RepID=K4ME09_9EURY
bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
RifSed_csp2_16ft_3_scaffold_12849_5
unknown

Not on your lists

3032..3121
DNA (90bp) protein (30aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_12849_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3327..3863
DNA (537bp) protein (179aa)
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:KCZ70408.1}; EC=3.6.3.41 {ECO:0000313|EMBL:KCZ70408.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1A9B4 related cluster Tax=unknown RepID=UPI0003D1A9B4
ABC heme exporter, ATPase subunit
RifSed_csp2_16ft_3_scaffold_12849_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3860..4549
DNA (690bp) protein (230aa)
UPI0003D1C721 related cluster Tax=unknown RepID=UPI0003D1C721
ABC-type transport system involved in cytochrome c biogenesis, permease component {ECO:0000313|EMBL:KCZ70409.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ABC heme exporter, inner membrane subunit B
RifSed_csp2_16ft_3_scaffold_12849_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4597..5286
DNA (690bp) protein (230aa)
UPI0003D1B57B related cluster Tax=unknown RepID=UPI0003D1B57B
ABC-type transport system involved in cytochrome c biogenesis, permease component {ECO:0000313|EMBL:KCZ70410.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ccmC; heme exporter protein C
RifSed_csp2_16ft_3_scaffold_12849_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(5281..5865)
DNA (585bp) protein (195aa)
30S ribosomal protein S3Ae Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=RS3A_METTP
30S ribosomal protein S3Ae {ECO:0000256|HAMAP-Rule:MF_00359, ECO:0000256|SAAS:SAAS00194211}; Ribosomal protein S1e {ECO:0000256|HAMAP-Rule:MF_00359}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S3Ae
RifSed_csp2_16ft_3_scaffold_12849_10
unknown

Not on your lists

comp(6430..6717)
DNA (288bp) protein (96aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_12849_11
unknown

Not on your lists

6895..7950
DNA (1056bp) protein (352aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_12849_12
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

8066..8536
DNA (471bp) protein (157aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI0003647103
hypothetical protein
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
RifSed_csp2_16ft_3_scaffold_12849_13
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

8540..8755
DNA (216bp) protein (72aa)
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
RifSed_csp2_16ft_3_scaffold_12849_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(9025..9615)
DNA (591bp) protein (197aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_12849_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(9635..10213)
DNA (579bp) protein (193aa)
Uncharacterized protein Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W758_UNCMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 15 items

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