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RifSed_csp2_16ft_3_scaffold_924

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_924_1
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73..1155)
DNA (1083bp) protein (361aa)
Porphyromonas-type peptidyl-arginine deiminase/hydrolase fusion protein Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BVS2_METCG
peptidyl-arginine deiminase/hydrolase fusion protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
RifSed_csp2_16ft_3_scaffold_924_2
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(1173..2408)
DNA (1236bp) protein (412aa)
Porphyromonas-type peptidyl-arginine deiminase/hydrolase fusion protein Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BVS2_METCG
peptidyl-arginine deiminase/hydrolase fusion protein
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
RifSed_csp2_16ft_3_scaffold_924_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2410..2532)
DNA (123bp) protein (41aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_924_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2596..3645
DNA (1050bp) protein (350aa)
UPI0003D19F94 related cluster Tax=unknown RepID=UPI0003D19F94
Putative heme d1 biosynthesis radical SAM protein NirJ2 {ECO:0000313|EMBL:KCZ70609.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nirJ; heme d1 biosynthesis protein NirJ
RifSed_csp2_16ft_3_scaffold_924_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3642..4097
DNA (456bp) protein (152aa)
AsnC family transcriptional regulator Tax=root RepID=M1PVR7_9ZZZZ
putative AsnC family transcriptional regulator
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_924_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

4203..5711
DNA (1509bp) protein (503aa)
hypothetical protein Tax=Acidovorax sp. MR-S7 RepID=UPI000378BF41
PAS/PAC sensor signal transduction histidine kinase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_924_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5715..6317)
DNA (603bp) protein (201aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72924.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_924_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6885..8132
DNA (1248bp) protein (416aa)
Archaeal glutamate synthase [NADPH] {ECO:0000256|PIRNR:PIRNR006429}; EC=1.4.1.13 {ECO:0000256|PIRNR:PIRNR006429};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glutamate synthase (EC:1.4.1.13)
Archaeal glutamate synthase [NADPH] Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D5M2_METSW
RifSed_csp2_16ft_3_scaffold_924_9

Not on your lists

comp(8158..8427)
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=halophilic archaeon DL31 RepID=G2MMT1_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN06707.1}; species="Archaea.;" source="halophilic archaeon DL31.;"
RifSed_csp2_16ft_3_scaffold_924_10

Not on your lists

comp(8424..8765)
DNA (342bp) protein (114aa)
Putative uncharacterized protein Tax=uncultured marine crenarchaeote HF4000_APKG6C9 RepID=B3T8V0_9ARCH
Putative transcriptional regulator {ECO:0000313|EMBL:AIF05422.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_182_G12.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_924_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8914..9402
DNA (489bp) protein (163aa)
Nitrous-oxide reductase {ECO:0000313|EMBL:KCZ70348.1}; EC=1.9.3.1 {ECO:0000313|EMBL:KCZ70348.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative uncharacterized protein bin=GWF2_OP3_43_52 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cytochrome C oxidase subunit II
RifSed_csp2_16ft_3_scaffold_924_12
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9399..10397
DNA (999bp) protein (333aa)
Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WRG7_METH6
Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein {ECO:0000313|EMBL:AET65708.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
RifSed_csp2_16ft_3_scaffold_924_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10413..11858
DNA (1446bp) protein (482aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70349.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative uncharacterized protein bin=GWF2_OP3_43_52 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RifSed_csp2_16ft_3_scaffold_924_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11874..12284
DNA (411bp) protein (137aa)
Nitrous oxide reductase {ECO:0000313|EMBL:KCZ70350.1}; EC=1.9.3.1 {ECO:0000313|EMBL:KCZ70350.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Cytochrome C oxidase subunit II, periplasmic domain protein bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RifSed_csp2_16ft_3_scaffold_924_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12296..13540
DNA (1245bp) protein (415aa)
Nitrate reductase cytochrome c-type subunit (NapB)/NapC/NirT cytochrome c family, N-terminal region {ECO:0000313|EMBL:KCZ72440.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein bin=bin1_lowGC species=Methanohalobium evestigatum genus=Methanohalobium taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
RifSed_csp2_16ft_3_scaffold_924_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

13530..15602
DNA (2073bp) protein (691aa)
Putative uncharacterized protein bin=GWB2_Nitrospirae_rel_47_37 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
RifSed_csp2_16ft_3_scaffold_924_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15852..16940
DNA (1089bp) protein (363aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71839.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_924_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16980..18035
DNA (1056bp) protein (352aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71839.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_924_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18064..18636
DNA (573bp) protein (191aa)
poly(R)-hydroxyalkanoic acid synthase Tax=Peptoniphilus rhinitidis RepID=UPI0002889E39
Poly(R)-hydroxyalkanoic acid synthase subunit {ECO:0000313|EMBL:KCZ71840.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phaE; putative poly(3-hydroxyalkanoate) synthase component
RifSed_csp2_16ft_3_scaffold_924_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

18682..19845
DNA (1164bp) protein (388aa)
Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCB6_DESTA
poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_924_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19842..20582
DNA (741bp) protein (247aa)
3-oxoacyl-[acyl-carrier protein] reductase Tax=Thermobrachium celere DSM 8682 RepID=R7RTU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KCZ71842.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
3-oxoacyl-(acyl-carrier-protein) reductase
RifSed_csp2_16ft_3_scaffold_924_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20627..21805
DNA (1179bp) protein (393aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KCZ71843.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KCZ71843.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
PaaJ; acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferases Tax=Caldanaerobacter subterraneus RepID=Q8RC88_THETN
RifSed_csp2_16ft_3_scaffold_924_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21808..22659
DNA (852bp) protein (284aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71844.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
3-oxoacyl-(acyl-carrier-protein) reductase bin=bin3_NC10 species=Archaeoglobus sulfaticallidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=bin3_NC10 organism_group=NC10
RifSed_csp2_16ft_3_scaffold_924_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22963..24006
DNA (1044bp) protein (348aa)
hypothetical protein Tax=candidate division YNPFFA RepID=UPI0003764AD2
Putative butyrate kinase {ECO:0000313|EMBL:KCZ71305.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_924_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24024..24569)
DNA (546bp) protein (182aa)
Phosphatidate cytidylyltransferase Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8G1_METMS
Dolichol kinase {ECO:0000313|EMBL:KCZ73106.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phosphatidate cytidylyltransferase family protein
RifSed_csp2_16ft_3_scaffold_924_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

24638..25948
DNA (1311bp) protein (437aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=PUR2_METBF
RifSed_csp2_16ft_3_scaffold_924_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25949..26125)
DNA (177bp) protein (59aa)
Preprotein translocase subunit SecG Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=SECG_METTP
Preprotein translocase subunit SecG {ECO:0000256|HAMAP-Rule:MF_00751}; Protein transport protein Sec61 subunit beta homolog {ECO:0000256|HAMAP-Rule:MF_00751}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
preprotein translocase subunit SecG
RifSed_csp2_16ft_3_scaffold_924_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

26330..28081
DNA (1752bp) protein (584aa)
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TMT4_METAC
Uncharacterized protein {ECO:0000313|EMBL:KCZ72495.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_924_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28122..29420)
DNA (1299bp) protein (433aa)
Putative uncharacterized protein Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12X83_METBU
Putative membrane protein {ECO:0000313|EMBL:KCZ70338.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_924_30
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

29508..30422
DNA (915bp) protein (305aa)
UPI0003D1AAD6 related cluster Tax=unknown RepID=UPI0003D1AAD6
GMP synthase, glutamine-hydrolyzing, C-terminal domain or B subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying items 1-30 of 39 in total

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