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RifSed_csp2_16ft_3_scaffold_946

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_946_1
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1..618
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X5E4_ACISM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW69491.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
RifSed_csp2_16ft_3_scaffold_946_2
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

818..2461
DNA (1644bp) protein (548aa)
Uncharacterized protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXH9_METHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB49801.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
RifSed_csp2_16ft_3_scaffold_946_3
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3063..3635
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXJ6_METHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB49821.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
RifSed_csp2_16ft_3_scaffold_946_4
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3637..4437
DNA (801bp) protein (267aa)
Uncharacterized protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYS6_METHD
Uncharacterized protein {ECO:0000313|EMBL:AKB18660.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_946_5
unknown

Not on your lists

4480..4581
DNA (102bp) protein (34aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_946_6
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4614..6527
DNA (1914bp) protein (638aa)
Phage tail sheath protein, putative Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74EI7_GEOSL
Tail protein {ECO:0000313|EMBL:KIE42946.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
phage tail sheath protein
RifSed_csp2_16ft_3_scaffold_946_7
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6590..7033
DNA (444bp) protein (148aa)
Conserved hypothetical phage tail region protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0D4_METHD
conserved hypothetical phage tail region protein
Conserved hypothetical phage tail region protein {ECO:0000313|EMBL:AGB49818.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
RifSed_csp2_16ft_3_scaffold_946_8
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7044..7409
DNA (366bp) protein (122aa)
Putative uncharacterized protein Tax=Desulfosporosinus sp. OT RepID=G2G250_9FIRM
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
RifSed_csp2_16ft_3_scaffold_946_9
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7612..8046
DNA (435bp) protein (145aa)
Conserved hypothetical phage tail region protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYS1_METHD
conserved hypothetical phage tail region protein
Conserved hypothetical phage tail region protein {ECO:0000313|EMBL:AGB49815.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
RifSed_csp2_16ft_3_scaffold_946_10
unknown

Not on your lists

8050..9165
DNA (1116bp) protein (372aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_946_11
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9166..9834
DNA (669bp) protein (223aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JAM4_9ARCH
LysM domain/BON superfamily protein {ECO:0000313|EMBL:AKB18667.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
LysM domain-containing protein
RifSed_csp2_16ft_3_scaffold_946_12
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9841..10929
DNA (1089bp) protein (363aa)
Putative uncharacterized protein Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I820_9BACL
VgrG protein {ECO:0000313|EMBL:AKB18668.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_946_13

Not on your lists

10926..11576
DNA (651bp) protein (217aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JAM5_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39155.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_946_14
RBG_16_Chloroflexi_48_7_curated, Chloroflexi, Bacteria

Not on your lists

11588..11881
DNA (294bp) protein (98aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JAM7_9ARCH
hypothetical protein
Tax=RBG_16_Chloroflexi_48_7_curated
RifSed_csp2_16ft_3_scaffold_946_15

Not on your lists

11896..12300
DNA (405bp) protein (135aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JAM8_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39158.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
phage baseplate assembly protein W
RifSed_csp2_16ft_3_scaffold_946_16
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12306..16757
DNA (4452bp) protein (1484aa)
Putative uncharacterized protein Tax=Desulfosporosinus sp. OT RepID=G2G241_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGW36025.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_946_17
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16744..19332
DNA (2589bp) protein (863aa)
hypothetical protein Tax=Paenibacillus elgii RepID=UPI000248C722
Uncharacterized protein {ECO:0000313|EMBL:KEQ26400.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_946_18

Not on your lists

19329..21440
DNA (2112bp) protein (704aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JAN1_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39161.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
phage tail protein
RifSed_csp2_16ft_3_scaffold_946_19

Not on your lists

21503..23032
DNA (1530bp) protein (510aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JAN2_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39162.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_946_20
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23061..24392
DNA (1332bp) protein (444aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JAN2_9ARCH
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
RifSed_csp2_16ft_3_scaffold_946_21
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24423..25184
DNA (762bp) protein (254aa)
glycosyl transferase Tax=Acidovorax radicis RepID=UPI00023751D3
wcaA1; glycosyltransferase
Tax=GWA2_Burkholderiales_64_37_curated
RifSed_csp2_16ft_3_scaffold_946_22
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

25274..25723
DNA (450bp) protein (150aa)
Hypothetical membrane protein Tax=uncultured archaeon RepID=D1JAN7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KHE93422.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_946_23
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

25974..26144
DNA (171bp) protein (57aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_946_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

26293..26655
DNA (363bp) protein (121aa)
RepP4 Tax=Borrelia parkeri RepID=Q9RG74_BORPR
Uncharacterized protein {ECO:0000313|EMBL:KCZ71690.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_946_25
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

26951..28813
DNA (1863bp) protein (621aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I036_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98623.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
RifSed_csp2_16ft_3_scaffold_946_26

Not on your lists

28815..29096
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:KER05306.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-E16.;"
RifSed_csp2_16ft_3_scaffold_946_27
unknown

Not on your lists

29311..29901
DNA (591bp) protein (197aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_946_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

30014..31447
DNA (1434bp) protein (478aa)
Uncharacterized protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWJ6_METHD
Uncharacterized protein {ECO:0000313|EMBL:KCZ70538.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_946_29
unknown

Not on your lists

31458..31748
DNA (291bp) protein (97aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_946_30
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

31735..32391
DNA (657bp) protein (219aa)
hypothetical protein Tax=Chlorogloeopsis RepID=UPI0002F0BBE6
Uncharacterized protein {ECO:0000313|EMBL:CCI03971.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9443.;"
hypothetical protein
Displaying items 1-30 of 35 in total

View Taxonomy