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RifSed_csp2_16ft_3_scaffold_3964

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_3964_1
unknown

Not on your lists

3..200
DNA (198bp) protein (66aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_3964_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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224..2293
DNA (2070bp) protein (690aa)
Uncharacterized protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AZ2_METBF
S-layer family duplication domain protein
S-layer family duplication domain protein {ECO:0000313|EMBL:AKB84007.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
RifSed_csp2_16ft_3_scaffold_3964_3
unknown

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comp(2191..2628)
DNA (438bp) protein (146aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_3964_4
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3203..3985
DNA (783bp) protein (261aa)
Uncharacterized protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXH1_METHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB49791.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
RifSed_csp2_16ft_3_scaffold_3964_5
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4103..4471)
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E640_METEZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI73062.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
RifSed_csp2_16ft_3_scaffold_3964_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4512..5099)
DNA (588bp) protein (196aa)
Uncharacterized protein Tax=Myroides odoratimimus CCUG 12700 RepID=S3Y6V3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KCZ71541.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_3964_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(5387..6112)
DNA (726bp) protein (242aa)
Putative PAS/PAC sensor protein Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D3T6_METSW
PAS/PAC sensor protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3964_8
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(6112..7542)
DNA (1431bp) protein (477aa)
Signal transduction histidine kinase Tax=Methanobacterium sp. (strain AL-21) RepID=F0TAP4_METSL
signal transduction histidine kinase
Tax=RBG_16_Spirochaetes_49_21_curated
RifSed_csp2_16ft_3_scaffold_3964_9
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(7539..7982)
DNA (444bp) protein (148aa)
response regulator receiver protein bin=bin1_lowGC species=Methanobacterium formicicum genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
response regulator receiver protein
Tax=RBG_13_Nitrospirae_43_8_curated
RifSed_csp2_16ft_3_scaffold_3964_10
RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated, Nitrospirae, Bacteria

Not on your lists

comp(7966..10095)
DNA (2130bp) protein (710aa)
response regulator receiver/GGDEF/EAL domain-containing protein bin=bin1_lowGC species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated
RifSed_csp2_16ft_3_scaffold_3964_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(10146..11624)
DNA (1479bp) protein (493aa)
Uncharacterized protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQ98_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3964_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12054..13142
DNA (1089bp) protein (363aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71839.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_3964_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

13186..13434
DNA (249bp) protein (83aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3964_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

13475..14530
DNA (1056bp) protein (352aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3964_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14560..15243
DNA (684bp) protein (228aa)
hypothetical protein Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034BA4FE
Poly(R)-hydroxyalkanoic acid synthase subunit {ECO:0000313|EMBL:KCZ71840.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
poly(R)-hydroxyalkanoic acid synthase subunit PhaE
RifSed_csp2_16ft_3_scaffold_3964_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

15268..16434
DNA (1167bp) protein (389aa)
Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCB6_DESTA
poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3964_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

16431..17171
DNA (741bp) protein (247aa)
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GD59_9FIRM
dehydrogenase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3964_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17225..18403
DNA (1179bp) protein (393aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KCZ71843.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KCZ71843.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
PaaJ; acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase Tax=Clostridium ultunense Esp RepID=M1YW01_9CLOT
RifSed_csp2_16ft_3_scaffold_3964_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18409..18933
DNA (525bp) protein (175aa)
3-oxoacyl-[acyl-carrier-protein] reductase Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AVV6_SYNWW
Uncharacterized protein {ECO:0000313|EMBL:KCZ71844.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
3-oxoacyl-(acyl-carrier protein) reductase
Displaying 19 items

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