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RifSed_csp2_16ft_3_scaffold_6389

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_6389_1
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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1..795
DNA (795bp) protein (265aa)
Uncharacterized protein containing caspase domain Tax=Sinorhizobium meliloti GR4 RepID=M4IHB5_RHIML
Uncharacterized protein containing caspase domain
Tax=RBG_16_Chloroflexi_57_11_curated
RifSed_csp2_16ft_3_scaffold_6389_2
bacterium UASB270, Bacteria

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805..3354
DNA (2550bp) protein (850aa)
hypothetical protein Tax=Desulfobacter curvatus RepID=UPI00036508D5
SEFIR domain protein {ECO:0000313|EMBL:GAK61110.1}; species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_6389_3
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3331..3795)
DNA (465bp) protein (155aa)
Uncharacterized protein Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LJ18_METBM
hypothetical protein
Tax=BJP_S1_SUB10_Methanoculleus_61_9
RifSed_csp2_16ft_3_scaffold_6389_4
unknown

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3878..4051
DNA (174bp) protein (58aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_6389_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4011..4613
DNA (603bp) protein (201aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_6389_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4910..5341)
DNA (432bp) protein (144aa)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:KCZ70691.1}; EC=5.2.1.8 {ECO:0000313|EMBL:KCZ70691.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family Tax=Chthonomonas calidirosea T49 RepID=S0EVE6_9BACT
RifSed_csp2_16ft_3_scaffold_6389_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5403..6635)
DNA (1233bp) protein (411aa)
Phytoene dehydrogenase and related protein Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7G3_METMS
Phytoene dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:KCZ71949.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Phytoene dehydrogenase and related protein
RifSed_csp2_16ft_3_scaffold_6389_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6790..8904)
DNA (2115bp) protein (705aa)
Phosphoesterase, RecJ domain protein Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B987_METTP
RecJ-like exonuclease with DnaJ-type Zn-finger domain {ECO:0000313|EMBL:KCZ71951.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phosphoesterase domain-containing protein
RifSed_csp2_16ft_3_scaffold_6389_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9044..9646
DNA (603bp) protein (201aa)
Probable thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Thymidylate kinase (EC:2.7.4.9)
Probable thymidylate kinase Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=KTHY_METAC
RifSed_csp2_16ft_3_scaffold_6389_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9652..10626)
DNA (975bp) protein (325aa)
Diphthamide synthase subunit Tax=Methanosarcina mazei Tuc01 RepID=M1P9W1_METMZ
Diphthamide biosynthesis enzyme Dph2 {ECO:0000313|EMBL:KCZ72241.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Diphthamide synthase subunit
RifSed_csp2_16ft_3_scaffold_6389_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10626..11273)
DNA (648bp) protein (216aa)
RNA-binding S4 domain protein Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XA7_METBU
Putative rRNA methylase {ECO:0000313|EMBL:KCZ70713.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RNA-binding S4
RifSed_csp2_16ft_3_scaffold_6389_trna_1
unknown

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11342..11427
DNA (86bp)
transferRNA Ser
RifSed_csp2_16ft_3_scaffold_6389_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(11458..12711)
DNA (1254bp) protein (418aa)
Putative esterase of the alpha-beta hydrolase superfamily Tax=Pleurocapsa sp. PCC 7327 RepID=K9TAJ8_9CYAN
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:KCZ71798.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
alpha/beta hydrolase fold protein
RifSed_csp2_16ft_3_scaffold_6389_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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12825..13157
DNA (333bp) protein (111aa)
SirA family protein Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXR7_FERPA
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:KCZ70950.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SirA family protein
RifSed_csp2_16ft_3_scaffold_6389_14
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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13578..14393
DNA (816bp) protein (272aa)
Uncharacterized protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FY6_METBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB43285.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
Displaying 15 items

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