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RifSed_csp2_16ft_3_scaffold_6403

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_6403_1
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..479)
DNA (477bp) protein (159aa)
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TJC1_METAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM03514.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
RifSed_csp2_16ft_3_scaffold_6403_2
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(476..1339)
DNA (864bp) protein (288aa)
Putative uncharacterized protein Tax=Methanoplanus limicola DSM 2279 RepID=H1Z385_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ36500.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limicola DSM 2279.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_6403_3
unknown

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1892..2104
DNA (213bp) protein (71aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_6403_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2207..2845)
DNA (639bp) protein (213aa)
Hypothetical conserved protein Tax=Crenarchaeota RepID=H5SVV4_9CREN
Acylphosphatase {ECO:0000313|EMBL:KCZ72742.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
acylphosphatase
RifSed_csp2_16ft_3_scaffold_6403_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2884..4584)
DNA (1701bp) protein (567aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00016154}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00088701};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Glutamate--tRNA ligase Tax=Methanolobus psychrophilus R15 RepID=K4MI15_9EURY
gltX; glutamyl-tRNA synthetase
RifSed_csp2_16ft_3_scaffold_6403_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4667..5446
DNA (780bp) protein (260aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YVS1_METPS
Metal-dependent hydrolase, beta-lactamase superfamily III {ECO:0000313|EMBL:KCZ71658.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_6403_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5443..5751)
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PY45_METTM
Uncharacterized protein, MTH1187 family {ECO:0000313|EMBL:KCZ71657.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_6403_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5906..7033
DNA (1128bp) protein (376aa)
Cell division protein FtsZ Tax=Candidatus Nitrososphaera gargensis RepID=K0ILB5_NITGG
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ftsZ3; cell division protein FtsZ
RifSed_csp2_16ft_3_scaffold_6403_9
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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8283..8627
DNA (345bp) protein (115aa)
DNA polymerase beta domain protein region Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQD1_ARCVS
DNA polymerase beta domain-containing protein
DNA polymerase beta domain protein region {ECO:0000313|EMBL:AEA46564.1}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (strain DSM 11195 / SNP6).;"
RifSed_csp2_16ft_3_scaffold_6403_10
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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8596..8994
DNA (399bp) protein (133aa)
HEPN domain protein Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQD2_ARCVS
HEPN domain-containing protein
HEPN domain protein {ECO:0000313|EMBL:AEA46565.1}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (strain DSM 11195 / SNP6).;"
RifSed_csp2_16ft_3_scaffold_6403_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9197..10168
DNA (972bp) protein (324aa)
ABC-type phosphate transport system, periplasmic component Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HCG0_METFS
ABC-type phosphate transport system, periplasmic component {ECO:0000313|EMBL:KCZ70279.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ABC-type phosphate transport system, periplasmic component
RifSed_csp2_16ft_3_scaffold_6403_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10188..11108
DNA (921bp) protein (307aa)
Phosphate ABC transporter, permease protein PstC Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0H9S0_METFS
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:KCZ70280.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phosphate ABC transporter, permease protein PstC
RifSed_csp2_16ft_3_scaffold_6403_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11101..11952
DNA (852bp) protein (284aa)
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:KCZ70281.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Phosphate ABC transporter permease PstA bin=CD_OP8_4m species=Tannerella sp. CAG:51 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
phosphate ABC transporter, permease protein PstA
RifSed_csp2_16ft_3_scaffold_6403_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11957..12946
DNA (990bp) protein (330aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phosphate ABC transporter ATP-binding protein, phot family (EC:3.6.3.27)
Phosphate-transporting ATPase bin=GWF2_Lentisphaerae_52_8 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
RifSed_csp2_16ft_3_scaffold_6403_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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13029..14249
DNA (1221bp) protein (407aa)
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:KCZ71554.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
FAD dependent oxidoreductase bin=GWB1_Spirochaetales_60_80 species=Thermoplasma acidophilum genus=Thermoplasma taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
glycine/D-amino acid oxidase
RifSed_csp2_16ft_3_scaffold_6403_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(14626..14799)
DNA (174bp) protein (58aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 16 items

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