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RifSed_csp2_16ft_3_scaffold_5263

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_5263_1
unknown

Not on your lists

390..620
DNA (231bp) protein (77aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_5263_2
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

675..1790
DNA (1116bp) protein (372aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IPD7_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB63582.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
radical SAM protein
RifSed_csp2_16ft_3_scaffold_5263_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1787..3742
DNA (1956bp) protein (652aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI000373FF54
radical SAM domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
RifSed_csp2_16ft_3_scaffold_5263_4
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3753..4109)
DNA (357bp) protein (119aa)
O-methyltransferase involved in polyketide biosynthesis Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMV3_METH6
O-methyltransferase involved in polyketide biosynthesis
O-methyltransferase involved in polyketide biosynthesis {ECO:0000313|EMBL:AET64518.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
RifSed_csp2_16ft_3_scaffold_5263_5
unknown

Not on your lists

comp(4136..4258)
DNA (123bp) protein (41aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_5263_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4367..5614
DNA (1248bp) protein (416aa)
Enolase (EC:4.2.1.11)
UPI0003D1A94B related cluster Tax=unknown RepID=UPI0003D1A94B
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_5263_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5718..5987
DNA (270bp) protein (90aa)
DNA/RNA-binding protein Alba Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=ALBA_METTP
DNA/RNA-binding protein Alba {ECO:0000256|HAMAP-Rule:MF_01122}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA-binding protein Alba
RifSed_csp2_16ft_3_scaffold_5263_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6225..7181
DNA (957bp) protein (319aa)
Cytochrome b subunit of formate dehydrogenase-like protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVN6_OPITP
Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit {ECO:0000313|EMBL:KCZ73276.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cytochrome b subunit of formate dehydrogenase-like protein
RifSed_csp2_16ft_3_scaffold_5263_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

7185..7940
DNA (756bp) protein (252aa)
hypothetical protein bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_5263_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8017..9153
DNA (1137bp) protein (379aa)
Deoxyhypusine synthase {ECO:0000313|EMBL:KCZ73278.1}; EC=2.5.1.45 {ECO:0000313|EMBL:KCZ73278.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
dys1; deoxyhypusine synthase (EC:2.5.1.46)
Putative deoxyhypusine synthase Tax=uncultured crenarchaeote RepID=Q701Z9_9CREN
RifSed_csp2_16ft_3_scaffold_5263_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

9204..9680
DNA (477bp) protein (159aa)
Uncharacterized protein Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAT9_METEZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_5263_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9683..10186
DNA (504bp) protein (168aa)
Putative uncharacterized protein Tax=Thermincola potens (strain JR) RepID=D5XAY8_THEPJ
Putative metal-binding protein {ECO:0000313|EMBL:KCZ72774.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_5263_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10264..10470
DNA (207bp) protein (69aa)
Putative uncharacterized protein Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ABR0_CARHZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ70894.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_5263_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10474..11415)
DNA (942bp) protein (314aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase Tax=Thermococcus litoralis DSM 5473 RepID=H3ZME9_THELI
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_5263_15
unknown

Not on your lists

11454..11684
DNA (231bp) protein (77aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_5263_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

11685..12860
DNA (1176bp) protein (392aa)
UPI0003D1A81D related cluster Tax=unknown RepID=UPI0003D1A81D
nucleotidyl transferase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_5263_17
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12857..13540)
DNA (684bp) protein (228aa)
Ribose-5-phosphate isomerase A Tax=Methanolobus psychrophilus R15 RepID=K4M6Y4_9EURY
ribose-5-phosphate isomerase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_5263_18
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13581..14600)
DNA (1020bp) protein (340aa)
ABC transporter, ATP-binding protein Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WR55_METH6
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AET65358.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
RifSed_csp2_16ft_3_scaffold_5263_19
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

15588..15917
DNA (330bp) protein (110aa)
RNA methyltransferase Tax=Microbulbifer variabilis RepID=UPI00037A49D5
RNA methyltransferase TrmH, group 3
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
Displaying 19 items

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