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RifSed_csp2_16ft_3_scaffold_11777

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_11777_1
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(2..367)
DNA (366bp) protein (122aa)
alpha/beta hydrolase fold protein bin=bin8_Chloro species=Methanosarcina mazei genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin8_Chloro organism_group=Chloroflexi
hydrolase
Tax=RBG_16_Planctomycetes_64_12_curated
RifSed_csp2_16ft_3_scaffold_11777_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

596..2002
DNA (1407bp) protein (469aa)
Phosphomannomutase {ECO:0000313|EMBL:KCZ71751.1}; EC=5.4.2.2 {ECO:0000313|EMBL:KCZ71751.1};; EC=5.4.2.8 {ECO:0000313|EMBL:KCZ71751.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S157_FERPA
RifSed_csp2_16ft_3_scaffold_11777_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1999..2400)
DNA (402bp) protein (134aa)
Mov34/MPN/PAD-1 family protein Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAL8_METMS
Putative metal-dependent protease of the PAD1/JAB1 superfamily {ECO:0000313|EMBL:KCZ71755.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Mov34/MPN/PAD-1 family protein
RifSed_csp2_16ft_3_scaffold_11777_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(2403..3383)
DNA (981bp) protein (327aa)
Radical SAM domain protein Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAL9_METMS
radical SAM protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_11777_5
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

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3498..4010
DNA (513bp) protein (171aa)
Tax=RBG_16_OP11_Levybacteria_35_11_curated
RifSed_csp2_16ft_3_scaffold_11777_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3952..4422
DNA (471bp) protein (157aa)
Putative uncharacterized protein Tax=uncultured archaeon GZfos37B2 RepID=Q648N9_9ARCH
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ71194.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_11777_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4860..5840)
DNA (981bp) protein (327aa)
Putative methyltransferase {ECO:0000313|EMBL:KCZ70324.1}; EC=2.1.1.- {ECO:0000313|EMBL:KCZ70324.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Methyltransferase Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CP0_METBF
tRNA (Guanine37-N1) -methyltransferase
RifSed_csp2_16ft_3_scaffold_11777_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5879..6706
DNA (828bp) protein (276aa)
Diphthine synthase {ECO:0000256|HAMAP-Rule:MF_01084}; EC=2.1.1.98 {ECO:0000256|HAMAP-Rule:MF_01084};; Diphthamide biosynthesis methyltransferase {ECO:0000256|HAMAP-Rule:MF_01084}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Diphthine synthase Tax=Methanolobus psychrophilus R15 RepID=K4MHR2_9EURY
diphthine synthase
RifSed_csp2_16ft_3_scaffold_11777_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6709..6846)
DNA (138bp) protein (46aa)
Putative uncharacterized protein Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EBY9_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ70322.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
protein identified by proteomics in Methanosarcina acetivorans (1)
RifSed_csp2_16ft_3_scaffold_11777_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6932..7087)
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70321.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_11777_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7154..7930)
DNA (777bp) protein (259aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT54_METAC
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:KCZ70320.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hpcE; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
RifSed_csp2_16ft_3_scaffold_11777_12
unknown

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8109..8255
DNA (147bp) protein (49aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_11777_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8277..8477
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNR8_METZD
Uncharacterized protein {ECO:0000313|EMBL:KCZ70319.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_11777_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8479..8739
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70318.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_11777_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

8863..9249
DNA (387bp) protein (129aa)
Phosphoribosylaminoimidazole carboxylase Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W7D4_UNCMA
phosphoribosylaminoimidazole carboxylase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_11777_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9227..10258)
DNA (1032bp) protein (344aa)
Uncharacterized protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CR1_METBF
Uncharacterized protein {ECO:0000313|EMBL:KCZ72966.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uncharacterized protein conserved in archaea
RifSed_csp2_16ft_3_scaffold_11777_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10265..10729)
DNA (465bp) protein (155aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71844.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
3-oxoacyl-(acyl-carrier-protein) reductase bin=bin3_NC10 species=Archaeoglobus sulfaticallidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=bin3_NC10 organism_group=NC10
3-oxoacyl-ACP reductase
Displaying 17 items

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