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RifSed_csp2_16ft_3_scaffold_1343

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_1343_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2..385)
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXH9_METHD
Uncharacterized protein {ECO:0000313|EMBL:KCZ70538.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_1343_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(399..2924)
DNA (2526bp) protein (842aa)
AAA+ family ATPase Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWL7_METHD
AAA+ family ATPase {ECO:0000313|EMBL:KCZ70560.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
AAA+ family ATPase
RifSed_csp2_16ft_3_scaffold_1343_3
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3057..3425)
DNA (369bp) protein (123aa)
adenylylsulfate reductase subunit beta Tax=Desulfospira joergensenii RepID=UPI0003B4A8BC
Tax=BJP_08E140C01_Coriobacteriales_62_12
RifSed_csp2_16ft_3_scaffold_1343_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3599..3952)
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0D8_METHD
Uncharacterized protein {ECO:0000313|EMBL:KCZ70561.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_1343_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4118..5401
DNA (1284bp) protein (428aa)
Putative DNA repair exonuclease Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9S3_METCZ
DNA repair exonuclease {ECO:0000313|EMBL:KCZ71925.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA repair exonuclease
RifSed_csp2_16ft_3_scaffold_1343_6
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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5402..7714
DNA (2313bp) protein (771aa)
Putative DNA repair ATPase (Rad50-like) Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9S4_METCZ
DNA repair ATPase (Rad50-like)
Putative DNA repair ATPase (Rad50-like) {ECO:0000313|EMBL:AFD00525.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
RifSed_csp2_16ft_3_scaffold_1343_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7708..8856
DNA (1149bp) protein (383aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYH1_METPS
NurA domain-containing protein {ECO:0000313|EMBL:KCZ71923.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_1343_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8861..9373
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYG8_METPS
Uncharacterized protein {ECO:0000313|EMBL:KCZ71922.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_1343_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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9374..10939
DNA (1566bp) protein (522aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYG7_METPS
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1343_10
Flexistipes sinusarabici, Flexistipes, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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comp(10943..12382)
DNA (1440bp) protein (480aa)
ATPase Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E935_FLESM
ATPase
ATPase {ECO:0000313|EMBL:AEI15237.1}; species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Flexistipes.;" source="Flexistipes sinusarabici (strain DSM 4947 / MAS 10).;"
RifSed_csp2_16ft_3_scaffold_1343_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12455..13351)
DNA (897bp) protein (299aa)
PHP domain-containing protein Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VU08_9EURY
Putative metal-dependent phosphoesterase, PHP family {ECO:0000313|EMBL:KCZ73309.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
PHP domain protein
RifSed_csp2_16ft_3_scaffold_1343_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13375..14628)
DNA (1254bp) protein (418aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=HEM1_METBU
RifSed_csp2_16ft_3_scaffold_1343_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14621..15277)
DNA (657bp) protein (219aa)
Siroheme synthase, N-terminal domain {ECO:0000313|EMBL:KCZ70748.1}; EC=1.3.1.76 {ECO:0000313|EMBL:KCZ70748.1};; EC=4.99.1.4 {ECO:0000313|EMBL:KCZ70748.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Siroheme synthase Tax=uncultured organism RepID=M1Q1W9_9ZZZZ
siroheme synthase
RifSed_csp2_16ft_3_scaffold_1343_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15274..15732)
DNA (459bp) protein (153aa)
Transcriptional regulator Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WM3_METBU
Transcriptional regulator {ECO:0000313|EMBL:KCZ70749.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
AsnC family transcriptional regulator
RifSed_csp2_16ft_3_scaffold_1343_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

15777..16142
DNA (366bp) protein (122aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1343_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16184..16753
DNA (570bp) protein (190aa)
Phosphatidylglycerophosphate synthase {ECO:0000313|EMBL:KCZ73027.1}; EC=2.7.8.5 {ECO:0000313|EMBL:KCZ73027.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Phosphatidylglycerophosphate synthase Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KW00_METHD
phosphatidylglycerophosphate synthase
RifSed_csp2_16ft_3_scaffold_1343_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

16785..17861
DNA (1077bp) protein (359aa)
myo-inositol-1-phosphate synthase (EC:5.5.1.4)
Myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1343_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17863..19191)
DNA (1329bp) protein (443aa)
Peptidase U62 family protein Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XJ5_METBU
Putative Zn-dependent protease-like protein {ECO:0000313|EMBL:KCZ73025.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
peptidase U62, modulator of DNA gyrase
RifSed_csp2_16ft_3_scaffold_1343_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19224..20861
DNA (1638bp) protein (546aa)
Uncharacterized protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AR0_METBF
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:KCZ73074.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
B12-binding domain/radical SAM domain protein, family
RifSed_csp2_16ft_3_scaffold_1343_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

21090..21749
DNA (660bp) protein (220aa)
ABC transporter ATP-binding protein Tax=Paenibacillus mucilaginosus RepID=H6NKP3_9BACL
ABC transporter ATP-binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1343_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

21739..22512
DNA (774bp) protein (258aa)
ABC-type transporter, integral membrane subunit Tax=Pelosinus fermentans RepID=I9AW52_9FIRM
binding-protein-dependent transport system inner membrane protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1343_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

22509..23519
DNA (1011bp) protein (337aa)
NMT1/THI5 like domain protein Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GH72_METPE
NMT1/THI5 like domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1343_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

23516..24472
DNA (957bp) protein (319aa)
ATP-NAD kinase bin=GWB2_Chloroflexi_49_20 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
ATP-NAD/AcoX kinase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1343_24
unknown

Not on your lists

24791..25096
DNA (306bp) protein (102aa)
VapB-like protein
RifSed_csp2_16ft_3_scaffold_1343_25
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

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25093..25506
DNA (414bp) protein (138aa)
PilT protein domain protein Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L4T7_KORCO
PilT domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:ACB07466.1}; species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
RifSed_csp2_16ft_3_scaffold_1343_26
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(25529..26893)
DNA (1365bp) protein (455aa)
UPI0003D1C6DC related cluster Tax=unknown RepID=UPI0003D1C6DC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
RifSed_csp2_16ft_3_scaffold_1343_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

26941..27075
DNA (135bp) protein (45aa)
Flavodoxin Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AU0_METBF
Putative flavoprotein {ECO:0000313|EMBL:KCZ73207.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Flavodoxin
RifSed_csp2_16ft_3_scaffold_1343_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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27056..27307
DNA (252bp) protein (84aa)
Putative flavoprotein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUA0_METHD
putative flavoprotein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1343_29
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

27304..27549
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Methanolobus psychrophilus R15 RepID=K4M9Y9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV23073.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psychrophilus R15.;"
RifSed_csp2_16ft_3_scaffold_1343_30
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27632..28513)
DNA (882bp) protein (294aa)
PfkB domain protein Tax=Sphingobacterium sp. (strain 21) RepID=F4C3J1_SPHS2
PfkB domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ADZ79379.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
Displaying items 1-30 of 44 in total

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