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RifSed_csp2_16ft_3_scaffold_1151_9

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(6854..7903)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TJB9_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 340.0
  • Bit_score: 316
  • Evalue 2.80e-83
NMD protein affecting ribosome stability and mRNA decay {ECO:0000313|EMBL:KCZ73369.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 346.0
  • Bit_score: 522
  • Evalue 3.60e-145
NMD protein affecting ribosome stability and mRNA decay similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 344.0
  • Bit_score: 320
  • Evalue 3.20e-85

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1050
ATGGTTAGATCATTCTGCCCCAGATGCGGCAATGATACCGACATCTTTATTGATAATGTATGCAGGCAGTGCTTTATTGGGGATAAGAAACTGCTTGAGTGTCCCCTGGTGATCTATGCGACCATATGTCCGGTATGCGGTTCAGTTTTCAGGAAAGGAAAATGGCAGTCAAAGGAAACAGAGAACCAGGTCATACTGGACTGTGTAAAGGATAACCTCAGGATAAATAGAGATGCCAGAAACATTGATCTCACACTGATCCCTGAGAAGCTGGATCATTCCAGATATCAGGTGCATGCCGGGGCAAAAGCTGAGATCAGAGGAATATCTCTGGATTCGGGGCTCGATACCGAAGTCAGAATAACATGGGAGACCTGCGATACATGCAGCAGGATCTCTGGAGGTTATTTTGAAGGCATAGTGCAGATAAGGGCTGATAAAAGGATCCCATCAAAGGAAGAACTCGATAAATGCATCAGCATTGCAGAGGAAGTAGCAGCACGCGCTCAGGAAAAAGGTGACAGGCTCGCATTCATTGCTAAAACAGTTGAACTTGATGAAGGCATGGACTTATACGTAGGGCTGATAAAACTTGGAAAACAGATCTGCAGGGCTATTACAGATTCTTTCGGGGGCAGGTTCACGGAATCACCCAAACTTGTGGGACAGAAAAACGGCGAGGATCTGTACAGGATCACATTCGCCCTCCGCCTCCCTGAATTCATGCGAGGGGATATTATAAGCGTGGACGATACCGTGATAGAGGTCCGAAGCTGCGGAAAGCAGGTAAGCGGCATTGAGCTTGAGACGGGGAAGAGATTTATCGAGAACTACAGTGATCTGATGCTGATTAAAAAACTTGGAAATAAGCAGGACGCTGTCCTTGCTGTGCTGATATCTGATGAAAAGACAGCGATCCAGGTACTGGATCCAGTATCTTATGAAACGGTCACTATCAAAAGACCTGAGTTCCTGTGCGCAGAGCCAGGAGATGAAATAAAGATCATAAAAACTGCAAAAGGGATCTATGCACTGCCCTGTGCTGATTAA
PROTEIN sequence
Length: 350
MVRSFCPRCGNDTDIFIDNVCRQCFIGDKKLLECPLVIYATICPVCGSVFRKGKWQSKETENQVILDCVKDNLRINRDARNIDLTLIPEKLDHSRYQVHAGAKAEIRGISLDSGLDTEVRITWETCDTCSRISGGYFEGIVQIRADKRIPSKEELDKCISIAEEVAARAQEKGDRLAFIAKTVELDEGMDLYVGLIKLGKQICRAITDSFGGRFTESPKLVGQKNGEDLYRITFALRLPEFMRGDIISVDDTVIEVRSCGKQVSGIELETGKRFIENYSDLMLIKKLGNKQDAVLAVLISDEKTAIQVLDPVSYETVTIKRPEFLCAEPGDEIKIIKTAKGIYALPCAD*