ggKbase home page

RifSed_csp2_16ft_3_scaffold_1151_12

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 13557..15194

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide repeat domain lipoprotein Tax=uncultured bacterium CSL12 RepID=G4WVI5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 367.0
  • Bit_score: 353
  • Evalue 2.50e-94
Tetratricopeptide repeat domain lipoprotein {ECO:0000313|EMBL:AEQ20437.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium CSL12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 367.0
  • Bit_score: 353
  • Evalue 3.50e-94
yscV; type III secretion pore protein similarity KEGG
DB: KEGG
  • Identity: 27.6
  • Coverage: 399.0
  • Bit_score: 127
  • Evalue 8.10e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium CSL12 → Bacteria

Sequences

DNA sequence
Length: 1638
ATGATAAAAAGTGAAATTCTGGATCAGATAAAGGTGGCTATTGAACTCTCGCCTTCCCTCAGGCATTTTGCTCTTGCAGAGGAAAATAGAGCTTTTAAGAAAGATCTCATGCGATGTCTGGATGATCTGGTATATGACCTCAGGATACCTGCAGAAATATCTTTGACCATAACGCCTGGCGAGGACAGGAATAGATTTTCCTTATGCTCGTATCAGGTCAGCATCAACGACAGGAAATGCAGGGTTCAGGTCCCGACGATAATTCCCGGCGATGTGCATGCCCTGGAGCTGGCAAATTCGATCGCTTATGAGATTCTCCAGAACCGTGAGCTATTATTAACGCCCCGCCTGTCTGAAAAGATCCAGGAGAAGTGGATAATTGACGGCATGGCATCTATGGAAAGATTCCATGAAATTCTTTTTGAACTTGTTCGAAGAGGGCTTCGAATTGATCGCGCAAAAGATATCGCATTGAAAGAACAGAGTGAACAGAACTTTGAGAAGAGTTTTGAAGAAATCTTTTACAACCTGGACTCGATAGCTGTCAAAGTTTTCCTCAGCAATGCTCAGAATGTGAAGACACAATCAGCTGCTGATGACATGTCATTTGAAGGCTTGCTTGATGTTTTGCAGGAGGGACTTTTTAATGAGCTCGGAATAATTATTCCAAAAGTCAGTATCGATATGGATGAGATACTTGAGGAGAATGATTTCATAATCCAGTTGAATGATGTTCGATTTCCTCCTATCACTGGCCTTGAACATGATCAATTTTTGGTGAACGATACTGTTGAAAGGCTTCCCCTTATCAATATAAAAGGCAAAAAAGTAATCATCCCCGCAAGTGGAACCGAAAACGCTATCGTTCAGAATAAAGAGCATGAGTTAGAGATCTGCAAAAAAGCAGGTTTGACTACATGGGGTTCAGGAGGCTTCACCGTGCTGAACCTTGCTGCCGAGCTCAGGAAAAACGCCGCCCTTTTCCTGACCGTTGAAACCGTAAAATACAGCCTGAAAAAATTGAAATCCAGTTCTCCGGCGTTTCCAGCGCTTGTGGATGCGGCATCGGAACATCATGATATCATAAGATTGACCCTCATTTTAAGAGACCTGCTGGATGAACAGCTTTCAATAAAAGACCTTCGAGGGATCCTGGAGAATCTGCTTGCGATCAGTGGTATTACGGACATTGACCAGAGCAAATATGTTGTTTTTTCTCCTCATACTGCAAATCTGTGTTCAGTTCAGGAAGGGAAAAAAATGGAGGATCTGAACATCATTGATTATTCGAATTGCCTGCGAATGTCGCTGAAGCGATATATTTCGAATAAATATACGAGAGGAAGCAGTGCTTTGTATGTATTTCCACTGGATCCCGGGATAGAGATGCGGATCAGGAGCACTGATGAGCAGCCACTGACCGATATAGAACGTGAAAAATTGATAAAAGCTATTTATGAGGCAATCAAGAATTTGCCGGCAGCAACCACCAATCCGGTCATATTGACGAGTGTGGAGATCAGAAAAAGACTGAGGAACCTGATAGAAAAGGAATTCCCGCGTATTGCAGTGCTGTGCTATCAGGAGCTTTTACCTGATCTGAATACTCAGCCGATCGCCAGGATCTCCTGGGATTGA
PROTEIN sequence
Length: 546
MIKSEILDQIKVAIELSPSLRHFALAEENRAFKKDLMRCLDDLVYDLRIPAEISLTITPGEDRNRFSLCSYQVSINDRKCRVQVPTIIPGDVHALELANSIAYEILQNRELLLTPRLSEKIQEKWIIDGMASMERFHEILFELVRRGLRIDRAKDIALKEQSEQNFEKSFEEIFYNLDSIAVKVFLSNAQNVKTQSAADDMSFEGLLDVLQEGLFNELGIIIPKVSIDMDEILEENDFIIQLNDVRFPPITGLEHDQFLVNDTVERLPLINIKGKKVIIPASGTENAIVQNKEHELEICKKAGLTTWGSGGFTVLNLAAELRKNAALFLTVETVKYSLKKLKSSSPAFPALVDAASEHHDIIRLTLILRDLLDEQLSIKDLRGILENLLAISGITDIDQSKYVVFSPHTANLCSVQEGKKMEDLNIIDYSNCLRMSLKRYISNKYTRGSSALYVFPLDPGIEMRIRSTDEQPLTDIEREKLIKAIYEAIKNLPAATTNPVILTSVEIRKRLRNLIEKEFPRIAVLCYQELLPDLNTQPIARISWD*