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SR-VP_26_10_2019_2_100cm_scaffold_8127

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_8127_1
RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..387
DNA (387bp) protein (129aa)
Nucleotide-binding protein, PIN domain protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YDL6_9ZZZZ
DNA-binding protein
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
SR-VP_26_10_2019_2_100cm_scaffold_8127_2
unknown

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467..2536
DNA (2070bp) protein (690aa)
DNA-binding protein MutS2 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WC4_METBU
DNA mismatch repair protein MutS-like protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_8127_3
unknown

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2555..3448
DNA (894bp) protein (298aa)
Glutamate synthase alpha subunit domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GX20_METFV
glutamate synthase subunit alpha domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_8127_4
unknown

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3529..3804
DNA (276bp) protein (92aa)
AbrB family transcriptional regulator
Transcriptional regulator, AbrB family id=1716917 bin=GWB2_Proteobacteria_55_19 species=Methanosaeta concilii genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_8127_5
unknown

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3819..4643
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI00037D6ED6
type 11 methyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_8127_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4685..5257
DNA (573bp) protein (191aa)
UPI0003D1AF49 related cluster n=1 Tax=unknown RepID=UPI0003D1AF49
Nitroreductase {ECO:0000313|EMBL:KCZ72840.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Nitroreductase
SR-VP_26_10_2019_2_100cm_scaffold_8127_7
unknown

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5262..6365
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FQB8_METHJ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_8127_8
unknown

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6369..6656
DNA (288bp) protein (96aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GGX8_METPE
4Fe-4S ferredoxin
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_8127_9
unknown

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comp(6827..7300)
DNA (474bp) protein (158aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_8127_10

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comp(7269..7724)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos1D1 RepID=Q64CQ0_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU82827.1}; TaxID=286721 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos1D1.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_8127_11
unknown

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comp(7790..8260)
DNA (471bp) protein (157aa)
Marine sediment metagenome DNA, contig: S01H1_S17755 {ECO:0000313|EMBL:GAG15767.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=5041603 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Displaying 11 items

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