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SR-VP_26_10_2019_2_100cm_scaffold_1204

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_1204_1
unknown

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comp(200..520)
DNA (321bp) protein (107aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1204_2
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(797..1246)
DNA (450bp) protein (150aa)
Putative uncharacterized protein PH0403 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58140_PYRHO
hypothetical protein
Nucleotidyltransferase {ECO:0000313|EMBL:EHR79140.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 /; NS-C).;"
SR-VP_26_10_2019_2_100cm_scaffold_1204_3
Thermococcus nautili, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(1239..1676)
DNA (438bp) protein (146aa)
DNA-binding protein n=1 Tax=Thermococcus zilligii RepID=UPI00029ABFA9
putative conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN
Putative conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN {ECO:0000313|EMBL:AHL22539.1}; TaxID=195522 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus nautili.;"
SR-VP_26_10_2019_2_100cm_scaffold_1204_4
unknown

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1758..1994
DNA (237bp) protein (79aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1204_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2016..2369
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72071.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_1204_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2418..3149)
DNA (732bp) protein (244aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71812.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_1204_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3198..3587)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EB45_METEZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ72070.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1204_8
unknown

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comp(3592..4377)
DNA (786bp) protein (262aa)
TIGR00161 family protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KX23_METHD
TIGR00161 family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1204_9
unknown

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4422..5879
DNA (1458bp) protein (486aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5R5_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1204_10
unknown

Not on your lists

5885..6688
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BQ1_METBF
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1204_11
unknown

Not on your lists

comp(6669..7415)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E885_METEZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1204_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7500..7916
DNA (417bp) protein (139aa)
Cytochrome c-type biogenesis protein CcmE {ECO:0000313|EMBL:KCZ72342.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_1204_13
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8136..9425
DNA (1290bp) protein (430aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WM06_METH6
Amino acid/polyamine/organocation transporter, APC superfamily
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:AET64381.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
SR-VP_26_10_2019_2_100cm_scaffold_1204_14
unknown

Not on your lists

9533..12139
DNA (2607bp) protein (869aa)
DNA mismatch repair protein MutS n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MQK8_9EURY
DNA mismatch repair protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1204_15
unknown

Not on your lists

comp(12159..20099)
DNA (7941bp) protein (2647aa)
Fibronectin type III domain protein (Fragment) id=2764031 bin=GWC2_Nitrospirae-rel_56_14 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1204_16
GWA2_OP3X_41_15_curated, Omnitrophica, Bacteria

Not on your lists

comp(20591..21178)
DNA (588bp) protein (196aa)
Tax=GWA2_OP3X_41_15_curated
SR-VP_26_10_2019_2_100cm_scaffold_1204_17
RIFOXYB2_FULL_WOR_2_38_16_curated, Omnitrophica, Bacteria

Not on your lists

21345..23873
DNA (2529bp) protein (843aa)
Serine/threonine protein kinase id=3610884 bin=GWF2_OP3_38_59 species=Methanocella conradii genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
tetratricopeptide protein
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
SR-VP_26_10_2019_2_100cm_scaffold_1204_18
unknown

Not on your lists

23851..24096
DNA (246bp) protein (82aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1204_19
unknown

Not on your lists

comp(24131..24370)
DNA (240bp) protein (80aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1204_20
unknown

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24418..26295
DNA (1878bp) protein (626aa)
Phosphoadenosine phosphosulfate reductase fused to RNA-binding PUA and 4Fe-4S binding domains n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UR6_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1204_21
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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26409..26645
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos27A8 RepID=Q64BL8_9ARCH
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1204_22
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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26642..26908
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos27A8 RepID=Q64BL9_9ARCH
plasmid stabilization system
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1204_23
unknown

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comp(26959..27255)
DNA (297bp) protein (99aa)
NADPH-dependent FMN reductase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7V894_DESML
iron-sulfur flavoprotein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1204_24
unknown

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comp(27252..27536)
DNA (285bp) protein (95aa)
NADPH-dependent FMN reductase n=2 Tax=Desulfovibrio africanus RepID=F3YYV0_DESAF
NADPH-dependent FMN reductase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1204_25
unknown

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28034..29251
DNA (1218bp) protein (406aa)
Transposase IS66 n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QZY9_PIRSD
Uncharacterized protein {ECO:0000313|EMBL:KKL14062.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase IS66
SR-VP_26_10_2019_2_100cm_scaffold_1204_26
unknown

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comp(29552..30133)
DNA (582bp) protein (194aa)

This feature has no annotations

Displaying 26 items

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