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SR-VP_26_10_2019_2_100cm_scaffold_984

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_984_1
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..882)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J3Z7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB31577.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_984_2
RBG_16_OP11_Gottesmanbacteria_43_7_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

1137..1412
DNA (276bp) protein (92aa)
Acetyltransferase RfbO, CysE/LacA/LpxA/NodL family n=1 Tax=Plautia stali symbiont RepID=U3U436_9ENTR
acetyltransferase RfbO, CysE/LacA/LpxA/NodL family
Tax=RBG_16_OP11_Gottesmanbacteria_43_7_curated
SR-VP_26_10_2019_2_100cm_scaffold_984_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1436..1741
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003760270
Putative membrane protein {ECO:0000313|EMBL:KCZ71316.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_984_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1764..2084
DNA (321bp) protein (107aa)
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ71318.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ArsR transcriptional regulator; K03892 ArsR family transcriptional regulator id=5041602 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
regulatory protein ArsR
SR-VP_26_10_2019_2_100cm_scaffold_984_5
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2081..2404
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PRZ6_METMA
Sulfur reduction protein DsrE {ECO:0000313|EMBL:KKH31899.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_984_6
unknown

Not on your lists

2417..2947
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8THJ3_METAC
Uncharacterized protein {ECO:0000313|EMBL:KKL93599.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_984_7
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2980..3324)
DNA (345bp) protein (115aa)
Transcriptional regulator, HxlR family n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E7S3_METEZ
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ADI74146.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
SR-VP_26_10_2019_2_100cm_scaffold_984_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3602..4048
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWC1_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX97024.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
SR-VP_26_10_2019_2_100cm_scaffold_984_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4130..5200
DNA (1071bp) protein (357aa)
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase {ECO:0000256|HAMAP-Rule:MF_01163}; EC=6.3.4.23 {ECO:0000256|HAMAP-Rule:MF_01163};; 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate--formate ligase {ECO:0000256|HAMAP-Rule:MF_01163}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMU5_METZD
IMP biosynthesis enzyme PurP domain-containing protein
SR-VP_26_10_2019_2_100cm_scaffold_984_10
unknown

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5197..6585
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PTV0_METMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_984_11
Methanosarcina sp. 2.H.T.1A.15, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6595..7869
DNA (1275bp) protein (425aa)
DNA-cytosine methyltransferase n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RK98_METP4
Cytosine methyltransferase {ECO:0000313|EMBL:KKG27866.1}; TaxID=1483596 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.15.;"
DNA-cytosine methyltransferase
SR-VP_26_10_2019_2_100cm_scaffold_984_12
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7869..8555
DNA (687bp) protein (229aa)
T/G-specific DNA glycosylase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8Q060_METMA
DNA glycosylase {ECO:0000313|EMBL:KKH45791.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
T/G-specific DNA glycosylase
SR-VP_26_10_2019_2_100cm_scaffold_984_13
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8565..10064
DNA (1500bp) protein (500aa)
Molecular chaperone of HSP90 family n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WG90_9CYAN
ATP-binding protein {ECO:0000313|EMBL:KKH45792.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
molecular chaperone of HSP90 family
SR-VP_26_10_2019_2_100cm_scaffold_984_14
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10066..12804
DNA (2739bp) protein (913aa)
Putative endonuclease, Z1 domain protein n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RKA0_METP4
Endonuclease {ECO:0000313|EMBL:KKH45793.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
putative endonuclease, Z1 domain-containing protein
SR-VP_26_10_2019_2_100cm_scaffold_984_15
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12791..13813
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1Z6_UNCMA
Uncharacterized protein {ECO:0000313|EMBL:KKG13675.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_984_16
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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13803..15845
DNA (2043bp) protein (681aa)
AIPR protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WFM0_9CYAN
Abortive phage infection protein {ECO:0000313|EMBL:KKG51644.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
AIPR protein
SR-VP_26_10_2019_2_100cm_scaffold_984_17
unknown

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15879..16298
DNA (420bp) protein (140aa)
DNA polymerase beta domain-containing protein
SR-VP_26_10_2019_2_100cm_scaffold_984_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16530..17402
DNA (873bp) protein (291aa)
Triphosphoribosyl-dephospho-CoA synthetase {ECO:0000313|EMBL:KCZ73283.1}; EC=2.4.2.52 {ECO:0000313|EMBL:KCZ73283.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative triphosphoribosyl-dephospho-CoA synthase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46C40_METBF
Triphosphoribosyl-dephospho-CoA synthetase
SR-VP_26_10_2019_2_100cm_scaffold_984_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17444..17974
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1P9U0_METMZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ73284.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_984_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18014..18682)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TR10_METAC
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KCZ70666.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_984_21
unknown

Not on your lists

comp(18679..19074)
DNA (396bp) protein (132aa)
UPF0212 protein Mzhil_0762 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKM3_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_984_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19090..19377)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TR13_METAC
Uncharacterized protein {ECO:0000313|EMBL:KCZ70668.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_984_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19629..20810)
DNA (1182bp) protein (394aa)
Bifunctional enzyme Fae/Hps n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EB20_METEZ
Bifunctional enzyme Fae/Hps {ECO:0000256|HAMAP-Rule:MF_01268}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
formaldehyde-activating enzyme
SR-VP_26_10_2019_2_100cm_scaffold_984_24
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20959..21579)
DNA (621bp) protein (207aa)
Uncharacterized protein {ECO:0000313|EMBL:KKI00310.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;"
SR-VP_26_10_2019_2_100cm_scaffold_984_25
unknown

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comp(21619..21714)
DNA (96bp) protein (32aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_984_26
unknown

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21868..22041
DNA (174bp) protein (58aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_984_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22183..25383
DNA (3201bp) protein (1067aa)
Carbamoyl-phosphate synthase large subunit {ECO:0000313|EMBL:KCZ70607.1}; EC=6.3.5.5 {ECO:0000313|EMBL:KCZ70607.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZB4_METHD
carbamoyl-phosphate synthase, large subunit
SR-VP_26_10_2019_2_100cm_scaffold_984_28
unknown

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comp(25402..25737)
DNA (336bp) protein (112aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_984_29
unknown

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comp(25734..25991)
DNA (258bp) protein (86aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_984_30
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

26159..26743
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W701_UNCMA
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:KCZ73073.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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