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SR-VP_26_10_2019_2_100cm_scaffold_2757

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2757_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2..1294
DNA (1293bp) protein (431aa)
Acetyl-CoA synthetase (ADP-forming) alpha subunit {ECO:0000313|EMBL:KCZ72377.1}; EC=6.2.1.13 {ECO:0000313|EMBL:KCZ72377.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
acdA; acetyl-CoA synthetase (ADP-forming) alpha subunit (EC:6.2.1.13)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos1D1 RepID=Q64CM7_9ARCH
SR-VP_26_10_2019_2_100cm_scaffold_2757_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1291..1938
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos1D1 RepID=Q64CM8_9ARCH
ATP-grasp domain protein {ECO:0000313|EMBL:KCZ72378.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2757_3
unknown

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1998..2306
DNA (309bp) protein (103aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2757_4
RBG_13_Lokiarchaeota_45_8_curated, Lokiarchaeota, Archaea

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2245..2664
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VN84_9EURY
hypothetical protein
Tax=RBG_13_Lokiarchaeota_45_8_curated
SR-VP_26_10_2019_2_100cm_scaffold_2757_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2712..4220)
DNA (1509bp) protein (503aa)
Seryl-tRNA synthetase {ECO:0000313|EMBL:KCZ70477.1}; EC=6.1.1.11 {ECO:0000313|EMBL:KCZ70477.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
serine--tRNA ligase (EC:6.1.1.11)
Type-2 serine--tRNA ligase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6B6_METEZ
SR-VP_26_10_2019_2_100cm_scaffold_2757_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4442..5356
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Streptomyces canus RepID=UPI00036A774E
putative endonuclease/exonuclease/phosphatase
Putative endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:AIC16637.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
SR-VP_26_10_2019_2_100cm_scaffold_2757_7
unknown

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5592..5753
DNA (162bp) protein (54aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2757_8
unknown

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5823..6032
DNA (210bp) protein (70aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2757_9
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6087..7043
DNA (957bp) protein (319aa)
Uncharacterized protein {ECO:0000313|EMBL:CDX20094.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2757_trna_2
unknown

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comp(7076..7158)
DNA (83bp)
transferRNA Leu
SR-VP_26_10_2019_2_100cm_scaffold_2757_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7294..8286
DNA (993bp) protein (331aa)
FO synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01611};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
FO synthase subunit 1 n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=UPI0000069145
cofG; FO synthase subunit 1
SR-VP_26_10_2019_2_100cm_scaffold_2757_11
unknown

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8314..9405
DNA (1092bp) protein (364aa)
FO synthase subunit 2 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XM51_METZD
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2757_trna_1
unknown

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comp(9420..9493)
DNA (74bp)
transferRNA Val
SR-VP_26_10_2019_2_100cm_scaffold_2757_12
unknown

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9592..11055
DNA (1464bp) protein (488aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12W38_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2757_13
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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11219..12727
DNA (1509bp) protein (503aa)
Putative uncharacterized protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7IAQ1_METB6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS56812.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
SR-VP_26_10_2019_2_100cm_scaffold_2757_14
unknown

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12666..13187
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7IAQ2_METB6
Marine sediment metagenome DNA, contig: S01H4_C04371 {ECO:0000313|EMBL:GAG70098.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2757_15
unknown

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comp(13280..13540)
DNA (261bp) protein (87aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2757_16
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(13933..14280)
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1P567_METMZ
Uncharacterized protein {ECO:0000313|EMBL:AKB14645.1}; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila CHTI-55.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2757_17
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(14271..14588)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMD6_METH6
Uncharacterized protein {ECO:0000313|EMBL:AKB14644.1}; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila CHTI-55.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2757_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(14697..16412)
DNA (1716bp) protein (572aa)
Aldehyde:ferredoxin oxidoreductase {ECO:0000313|EMBL:KCZ70428.1}; EC=1.2.7.5 {ECO:0000313|EMBL:KCZ70428.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Aldehyde ferredoxin oxidoreductase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MCQ7_9EURY
aldehyde ferredoxin oxidoreductase
SR-VP_26_10_2019_2_100cm_scaffold_2757_19
unknown

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16554..17693
DNA (1140bp) protein (380aa)
dys1; deoxyhypusine synthase (EC:2.5.1.46)
Putative deoxyhypusine synthase n=1 Tax=uncultured crenarchaeote RepID=Q701Z9_9CREN
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2757_20
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17897..18049)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4C0I5_METCG
Uncharacterized protein {ECO:0000313|EMBL:KFD41896.1}; TaxID=1487582 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
hypothetical protein
Displaying 22 items

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