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SR-VP_26_10_2019_C_40cm_scaffold_513

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_513_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

262..5781
DNA (5520bp) protein (1840aa)
Serine-rich surface protein (Adhesin) with putative Ig domain, two dockerin type 1 domains and a cohesin domain n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XY3_METBU
Uncharacterized protein {ECO:0000313|EMBL:KCZ70815.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Ig
SR-VP_26_10_2019_C_40cm_scaffold_513_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(5786..6676)
DNA (891bp) protein (297aa)
KaiC n=1 Tax=Methanolobus psychrophilus R15 RepID=K4ME93_9EURY
KaiC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_513_3
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6878..8185
DNA (1308bp) protein (436aa)
Transposase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVY6_METMA
Mobile element protein
Mobile element protein {ECO:0000313|EMBL:AKB48354.1}; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. Kolksee.;"
SR-VP_26_10_2019_C_40cm_scaffold_513_4
unknown

Not on your lists

comp(8388..8549)
DNA (162bp) protein (54aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_513_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8762..9382)
DNA (621bp) protein (207aa)
V-type ATP synthase subunit D n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MHF0_9EURY
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
V-type ATP synthase subunit D
SR-VP_26_10_2019_C_40cm_scaffold_513_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(9384..10778)
DNA (1395bp) protein (465aa)
V-type ATP synthase beta chain n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYC8_METHD
ATP synthase, B subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_513_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10780..12513)
DNA (1734bp) protein (578aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
V-type ATP synthase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=VATA_METBU
SR-VP_26_10_2019_C_40cm_scaffold_513_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12572..12871)
DNA (300bp) protein (100aa)
V-type ATP synthase subunit F n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MHI3_9EURY
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
V-type ATP synthase subunit F
SR-VP_26_10_2019_C_40cm_scaffold_513_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12872..13891)
DNA (1020bp) protein (340aa)
V-type ATP synthase subunit C (EC:3.6.3.14)
V-type ATP synthase subunit C n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=VATC_METBU
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_513_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13896..14447)
DNA (552bp) protein (184aa)
V-type proton ATPase subunit E n=2 Tax=root RepID=D7E6E3_METEZ
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
H+transporting two-sector ATPase E subunit
SR-VP_26_10_2019_C_40cm_scaffold_513_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14462..14686)
DNA (225bp) protein (75aa)
ATP synthase subunit C {ECO:0000313|EMBL:KCZ71345.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KCZ71345.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
H+transporting two-sector ATPase C subunit n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1G8_FERPA
H+transporting two-sector ATPase C subunit
SR-VP_26_10_2019_C_40cm_scaffold_513_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14692..16665)
DNA (1974bp) protein (658aa)
A-type ATP synthase subunit I n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YVE4_METPS
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
atpI-1; A-type ATP synthase subunit I
SR-VP_26_10_2019_C_40cm_scaffold_513_13
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16658..16984)
DNA (327bp) protein (109aa)
ATP synthase H subunit n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XP32_METZD
ATP synthase H subunit
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_513_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17102..17740)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5U3_METTP
Dolichol kinase {ECO:0000313|EMBL:KCZ73121.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_513_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(17747..19537)
DNA (1791bp) protein (597aa)
Glycyl-tRNA synthetase {ECO:0000313|EMBL:KCZ73120.1}; EC=6.1.1.14 {ECO:0000313|EMBL:KCZ73120.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1BF38 related cluster n=1 Tax=unknown RepID=UPI0003D1BF38
glycyl-tRNA synthetase, dimeric type
SR-VP_26_10_2019_C_40cm_scaffold_513_16
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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comp(19801..20913)
DNA (1113bp) protein (371aa)
Putative uncharacterized protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IBR5_ACIB4
Putative uncharacterized protein {ECO:0000313|EMBL:EDY36249.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T469).;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_513_17
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21239..22126)
DNA (888bp) protein (296aa)
Uncharacterized protein id=5800436 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Delta_07
SR-VP_26_10_2019_C_40cm_scaffold_513_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(22238..23410)
DNA (1173bp) protein (391aa)
methionine gamma-lyase (EC:4.4.1.11)
Methionine gamma-lyase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RY77_THEOJ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_513_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(23432..24301)
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12YZ2_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_513_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24382..24846)
DNA (465bp) protein (155aa)
Cytidyltransferase-related enzyme {ECO:0000313|EMBL:KCZ71722.1}; EC=2.7.7.3 {ECO:0000313|EMBL:KCZ71722.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Phosphopantetheine adenylyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=COAD_METBF
pantetheine-phosphate adenylyltransferase
SR-VP_26_10_2019_C_40cm_scaffold_513_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

24979..26487
DNA (1509bp) protein (503aa)
lysK; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B789_METTP
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_513_22
R_RIF_OD1_12_45_17b, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

26576..27484
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Anabaena sp. PCC 7108 RepID=UPI000349F77E
restriction endonuclease
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_45_17b_curated
SR-VP_26_10_2019_C_40cm_scaffold_513_23
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

27514..27834
DNA (321bp) protein (107aa)
Putative nucleotidyltransferase n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEZ4_METFS
putative nucleotidyltransferase
Putative nucleotidyltransferase {ECO:0000313|EMBL:AGB01888.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
SR-VP_26_10_2019_C_40cm_scaffold_513_24
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

27812..27919
DNA (108bp) protein (36aa)
Tax=CG_OP9-01
SR-VP_26_10_2019_C_40cm_scaffold_513_25
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(27941..28315)
DNA (375bp) protein (125aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_513_26
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(28343..28789)
DNA (447bp) protein (149aa)
Small heat shock protein (Hsp20-1) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28973_ARCFU
Molecular chaperone (small heat shock protein)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_513_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28794..31007)
DNA (2214bp) protein (738aa)
AAA ATPase (EC:3.6.1.3)
AAA family ATPase, CDC48 subfamily n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPD2_METZD
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:KCZ71917.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_513_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(31069..33252)
DNA (2184bp) protein (728aa)
AAA family ATPase, CDC48 subfamily protein (EC:3.6.4.6)
AAA family ATPase, CDC48 subfamily n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B6J8_METTP
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_513_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(33294..33791)
DNA (498bp) protein (166aa)
Small heat shock protein (Hsp20-1) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28973_ARCFU
Molecular chaperone (Small heat shock protein) {ECO:0000313|EMBL:KCZ72075.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Molecular chaperone (small heat shock protein)
SR-VP_26_10_2019_C_40cm_scaffold_513_30
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(33820..34443)
DNA (624bp) protein (208aa)
Hth5 family protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8THE1_METAC
Hth5 family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying items 1-30 of 70 in total

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