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SR-VP_26_10_2019_C_40cm_scaffold_1201

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_1201_1
unknown

Not on your lists

comp(1..111)
DNA (111bp) protein (37aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1201_2
unknown

Not on your lists

comp(327..725)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Dehalococcoides mccartyi RepID=V5Q9W6_9CHLR
Marine sediment metagenome DNA, contig: S03H2_S11109 {ECO:0000313|EMBL:GAH75085.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_1201_3
unknown

Not on your lists

883..1164
DNA (282bp) protein (94aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1201_4
unknown

Not on your lists

comp(1243..1755)
DNA (513bp) protein (171aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1201_5
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1745..2557)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZM18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ98177.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
SR-VP_26_10_2019_C_40cm_scaffold_1201_6
unknown

Not on your lists

2850..2984
DNA (135bp) protein (45aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1201_7
unknown

Not on your lists

comp(3038..4336)
DNA (1299bp) protein (433aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12X83_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1201_8
unknown

Not on your lists

4400..5086
DNA (687bp) protein (229aa)
Uroporphyrinogen III synthase HEM4 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMW6_METZD
uroporphyrinogen III synthase HEM4
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1201_9
unknown

Not on your lists

comp(5215..5448)
DNA (234bp) protein (78aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1201_10
RBG_16_OP11_Woesebacteria_34_12_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

5488..6402
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YJE9_THEYD
hypothetical protein
Tax=RBG_16_OP11_Woesebacteria_34_12_curated
SR-VP_26_10_2019_C_40cm_scaffold_1201_11
unknown

Not on your lists

comp(6476..7567)
DNA (1092bp) protein (364aa)
Cell division protein FtsZ n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IKP2_NITGG
ftsZ2; cell division protein FtsZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1201_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7697..8731)
DNA (1035bp) protein (345aa)
Nitrate ABC transporter, ATP-binding protein, putative n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29615_ARCFU
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:KCZ72819.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrate ABC transporter ATP-binding protein
SR-VP_26_10_2019_C_40cm_scaffold_1201_13
unknown

Not on your lists

comp(8728..10536)
DNA (1809bp) protein (603aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY37_9BACT
integral membrane sensor signal transduction histidine kinase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1201_14
unknown

Not on your lists

comp(10550..11059)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAF8_9ARCH
response regulator receiver protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1201_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11211..11534)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAF5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ71101.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_1201_16
unknown

Not on your lists

11771..11998
DNA (228bp) protein (76aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1201_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12393..12662
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000378BF98
Uncharacterized protein {ECO:0000313|EMBL:KCZ73089.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_1201_18
unknown

Not on your lists

12735..12995
DNA (261bp) protein (87aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1201_19
unknown

Not on your lists

13018..13257
DNA (240bp) protein (80aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1201_20

Not on your lists

13437..14669
DNA (1233bp) protein (411aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JFY9_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH37447.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Extracellular ligand-binding receptor
SR-VP_26_10_2019_C_40cm_scaffold_1201_21
unknown

Not on your lists

15005..15175
DNA (171bp) protein (57aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1201_22
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15202..15765)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JVU1_BURP8
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
SR-VP_26_10_2019_C_40cm_scaffold_1201_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(15774..16460)
DNA (687bp) protein (229aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=FLPA_METBF
Fibrillarin
SR-VP_26_10_2019_C_40cm_scaffold_1201_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16542..17669)
DNA (1128bp) protein (376aa)
Isocitrate/isopropylmalate dehydrogenase {ECO:0000313|EMBL:KCZ71994.1}; EC=1.1.1.85 {ECO:0000313|EMBL:KCZ71994.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
3-isopropylmalate dehydrogenase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TU72_METAC
leuB; 3-isopropylmalate dehydrogenase
SR-VP_26_10_2019_C_40cm_scaffold_1201_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17779..18978
DNA (1200bp) protein (400aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KCZ71900.1}; EC=1.3.8.7 {ECO:0000313|EMBL:KCZ71900.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Acyl-CoA dehydrogenase domain protein id=4546173 bin=GWC2_Planctomycete_KSU_39_26 species=unknown genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
acyl-CoA dehydrogenase domain-containing protein
SR-VP_26_10_2019_C_40cm_scaffold_1201_26
unknown

Not on your lists

comp(18972..19193)
DNA (222bp) protein (74aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1201_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19202..19321)
DNA (120bp) protein (40aa)
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:KCZ71902.1}; EC=4.2.1.55 {ECO:0000313|EMBL:KCZ71902.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
enoyl-CoA hydratase (EC:4.2.1.17)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q182_9BACT
SR-VP_26_10_2019_C_40cm_scaffold_1201_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19363..19977)
DNA (615bp) protein (205aa)
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:KCZ71902.1}; EC=4.2.1.55 {ECO:0000313|EMBL:KCZ71902.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
3-hydroxybutyryl-CoA dehydratase n=2 Tax=Clostridium carboxidivorans P7 RepID=D6M9A0_9CLOT
3-hydroxybutyryl-CoA dehydratase
SR-VP_26_10_2019_C_40cm_scaffold_1201_29

Not on your lists

comp(19961..20812)
DNA (852bp) protein (284aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=planctomycete KSU-1 RepID=I3IJA5_9PLAN
Tax=RIFCSPHIGHO2_12_Planctomycetes_42_15_curated
SR-VP_26_10_2019_C_40cm_scaffold_1201_30
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21266..22816
DNA (1551bp) protein (517aa)
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:KCZ72007.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KCZ72007.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
N-6 DNA methylase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFG8_9CHLR
Displaying items 1-30 of 46 in total

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