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SR-VP_26_10_2019_C_40cm_scaffold_1900_10

Organism: SR-VP_26_10_2019_C_40cm_Methanoperedens_44_15

near complete RP 30 / 55 MC: 3 BSCG 27 / 51 ASCG 37 / 38 MC: 1
Location: comp(7389..10616)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U9S1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 804.0
  • Bit_score: 458
  • Evalue 1.10e-125
PAS domain S-box {ECO:0000313|EMBL:EKQ54049.1}; TaxID=1220534 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium sp. Maddingley MBC34.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.4
  • Coverage: 804.0
  • Bit_score: 458
  • Evalue 1.50e-125
two-component hybrid sensor and regulator similarity KEGG
DB: KEGG
  • Identity: 31.6
  • Coverage: 896.0
  • Bit_score: 390
  • Evalue 1.00e-105

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Taxonomy

Methanobacterium sp. Maddingley MBC34 → Methanobacterium → Methanobacteriales → Methanobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 3228
ATGGAAAGATTATCCGAGAGGAAATTTCTGACATCTCAGGTCGACTGGGTGAAAAAAGAGTCAAAAACCCAGGCAAATAATTTTGCTGAACTTAGCCAAAGGGTTGCGCAATTAGAAAAATCAGAAAAAGAGCTCAAGATAGTTGAAAAGATCCTGCAACACCGGATAGCTATGGAGAAGTTCATCACCAGTATTTCAACAAGCTTTATGAACCTGCCTTCTGACAAAATAAACATTGGTATCAACAGAAGCCTGAAAATAATAGGAAATTTTGCAGAGGTTGATCGAAGTTGTGTATTCCAATTTTACGATAACGGGAAAAAAATGGATAATACTCATGAGTGGTGTGCAAAAGGCATAGGACGGCAAATGCAGAACCTCAAGGGATTATTAACAGATGATTTTCCATGGTCTATTAAGAAGATAAAGAAATTTGAGACAATTCATGTTCCGAGTCTGATCGAACTGCCGGCTAAGGCACGTGCTGAAAAAAAAAGTTTTCAAATTCAAGGGATTAAATCCCTCATAATCGTTCCTATGGTCTATGGCAACTCTTCAATTGGATTTCTAAGATTTGATTCGATAAGGAGAGAGAAAACCTGGCTGGAAGATGACATTCGATTGCTCAAAATGGTAAGCAAAATTTTTGTGAATGCACTGATGTTCAAGAAAGTGGGCGAAGAACTTAAAGAATCGGAAGAAAAATATCGAACACTTTTTGATACAATGGTGCAGGGGGTCGTCTGCCAAAATGCTGATGGAGAGATAACCTCTGCAAATCCCGCTGCTCAAAGGATGTTAGGTCTAACGCTCAATCAGATGCAGGGCAGAACACCAATGGATCCTCGGTGGAAGGCGATCCATGAAGACGGCTCGGATTTCACGGGAGAAACTCACCATGCCATGATTGCCCTGAAGACCGGAAAAGAAGTCAAGAACGTGGTCATGGGCGTCTTTGATCCTGAAAAAGAAGAATCCAGGTGGATCAATGTTCATTCTATACCGCAATTCATACCTGGAGAAGACAAACCCAACAAGGTATGTACAACTTTTGAGGACATCACTGAACGCAGGCATGTGGAAGTATTACTTAAGCGGAGCGAAGACCGCCTTTCAGAGACCCAGAGAGTAGCGAGTATAGGGAATTGGGATTGGAACCTGCAAACAAATGAATTATATTGGTCTCCTGAAAACTATCGAATTTTTGGATTCTCCCAGATGGAATTTAGTCCATCAGTCGAAAAATTCCTGGATACGGTTCATCCTGATGACCGGGAATTTGTCAAAAAATCCATTGATGATGCATTAAATATGAAAAAATCTTACGACATTGATATGCGCATAATACGGTCCGACGGCATAGAGCGTATTGTGCGCGCAAAGGGTGAAGTATTTTTTGATGATTCAGGTAAACCCATAAAAATGTTTGGAACAGTCCAGGACATCACAGAATGGAAACAGTCCGAGGCCAGACTGAAGCATTCAGAGGAAAAATACAGGGATCTGTTCGAGAATGCAAATGATGTGATATGCATAATAGATTCTGATCTGAAGTATAAGGATGTCAATAAAAAGACAGAGGAGATGTTGGGTTACACCAGGGATGAAATGCTGAATATGACTGTATTTGACATTATCCCGGCGGAACAAATCCCCATATCTGAAATTGAATTCAATAAATTAATTAAAGAAGGATCGTATGAAAAGTTTGTCGGGAAAGCCCGCACAAAAGATGGGCGACTTATTGACGTCGAAGTAAGCTCATCCGCTATTAAAGAGGGAGATAAAATCATAGGTTCAAGAGATATTATACGTGATATTACAGAGCGCATGCTGATCGAAGAGGCGTTGCGAGAACGTGAGGAGCAATACCGTAATATAATAGAATATTCCAACGATATGATCTGGATTCTGGATCCAGAAGGCAATTTCCAGTTCTTTAACAAACGCTCTGAAGAGATGAGCGGGCATAGATTGGAGGATTGGAAAGCTAAGTCTTTCATTCCACTTATCATTGAAGATGATTTGCCCAACGCTATTGAAGTATTCCACAAAACAATGAGTGGTCAACCTCAGCAGTATGAGGTATCTATTAAAAAGATAGATGGCAGTATACTAATTCTTTCAGTAAATACAGCTCCAATTTATTCAAAAGGAAATGTTGTAGGATCGGTGAGTTTTGGCAGGGACATCACCCAGCGAAAAAGGGCAGAGGAGGAACTGCGGAAGAGGGATCGCCAGCAAAAAGCGATTCTCAATAACATACCTGATATGGCCTGGTTGAAAGATAAGGAGAGCAGATATATAGCAGCGAATGAAGCTTTCGCGGCCTCGTGCGGAGTGAGTCCTGAAGAGTTGGTCGGCAAAACTGATCTTGATTTATGGCCGAAGGATTTGGCAGAAAAATACAGGGATGATGATAGAGACGTCATGGAATCAGGAAAACAAAAACAGCTGGAAGAGCCTTTAACAAATATTGAAGGCAAAAAGACGTGGGTGGAGACGATCAAAACCCCGATTTATAACGATGAGGGTGAGGTCATAGGTACGACTGGAATTGCTCATGATATCACAGAACGCAAAAAAGCAGAAGAGCAAATAGAAAAATCCCTCAGAGAAAAAGAAGTGCTCCTCAGGGAAGTCTACCACCGGGTGAAAAATAATATGCAGATTATCACAAGCCTGCTGAGGCTTCAGTCCAGATATATAAAGGAGGAAGAGTACCGTGAGATGTTTAAGGAAAGCCAGAGCAGGATCAAGTCAATGTCTCTTGTCCACGAGAAACTTTATCAATCCAAAAACCTGGCGCGAATTGATTTCAAGGAGTACGTAGGGGATATGGTAAAAGATCTGTTTCAGTCCTATGGAGCCAATAAAGGAAACATAGCACTAAATATAGATGTTAAGAAAACTTCATTGGGTATCGATTCCGCGATTCCTTGCGGGCTGATTATCAACGAACTCGTTACCAACTCTTTGAAATATGCATTTCCAGAAGGCAGGAAAGGTGAAATTAAGATATCTCTCCGTTCACCTTATAAAAAGGCAATTGAACTGGTAGTAGCTGATAATGGCATAGGTATTCCTGAAGATGTGGATTTTAAAAGAACAAAATCGCTGGGTTTGCACCTTGTTACAATGCTGGCAGAAAATCAGCTTCATGGCGAGATAAACCTGAATCGAATCAAAGGGACCAAATTTAAGATTAAATTTAAGGAAATGAAATGA
PROTEIN sequence
Length: 1076
MERLSERKFLTSQVDWVKKESKTQANNFAELSQRVAQLEKSEKELKIVEKILQHRIAMEKFITSISTSFMNLPSDKINIGINRSLKIIGNFAEVDRSCVFQFYDNGKKMDNTHEWCAKGIGRQMQNLKGLLTDDFPWSIKKIKKFETIHVPSLIELPAKARAEKKSFQIQGIKSLIIVPMVYGNSSIGFLRFDSIRREKTWLEDDIRLLKMVSKIFVNALMFKKVGEELKESEEKYRTLFDTMVQGVVCQNADGEITSANPAAQRMLGLTLNQMQGRTPMDPRWKAIHEDGSDFTGETHHAMIALKTGKEVKNVVMGVFDPEKEESRWINVHSIPQFIPGEDKPNKVCTTFEDITERRHVEVLLKRSEDRLSETQRVASIGNWDWNLQTNELYWSPENYRIFGFSQMEFSPSVEKFLDTVHPDDREFVKKSIDDALNMKKSYDIDMRIIRSDGIERIVRAKGEVFFDDSGKPIKMFGTVQDITEWKQSEARLKHSEEKYRDLFENANDVICIIDSDLKYKDVNKKTEEMLGYTRDEMLNMTVFDIIPAEQIPISEIEFNKLIKEGSYEKFVGKARTKDGRLIDVEVSSSAIKEGDKIIGSRDIIRDITERMLIEEALREREEQYRNIIEYSNDMIWILDPEGNFQFFNKRSEEMSGHRLEDWKAKSFIPLIIEDDLPNAIEVFHKTMSGQPQQYEVSIKKIDGSILILSVNTAPIYSKGNVVGSVSFGRDITQRKRAEEELRKRDRQQKAILNNIPDMAWLKDKESRYIAANEAFAASCGVSPEELVGKTDLDLWPKDLAEKYRDDDRDVMESGKQKQLEEPLTNIEGKKTWVETIKTPIYNDEGEVIGTTGIAHDITERKKAEEQIEKSLREKEVLLREVYHRVKNNMQIITSLLRLQSRYIKEEEYREMFKESQSRIKSMSLVHEKLYQSKNLARIDFKEYVGDMVKDLFQSYGANKGNIALNIDVKKTSLGIDSAIPCGLIINELVTNSLKYAFPEGRKGEIKISLRSPYKKAIELVVADNGIGIPEDVDFKRTKSLGLHLVTMLAENQLHGEINLNRIKGTKFKIKFKEMK*