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SR-VP_26_10_2019_2_100cm_scaffold_1417

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_1417_1

Not on your lists

1..549
DNA (549bp) protein (183aa)
histidine kinase (EC:2.7.13.3)
Histidine kinase,HAMP domain-containing protein,histidine kinase,cache domain-containing protein,GAF domain-containing protein id=3112752 bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium sp. WSM1253 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SR-VP_26_10_2019_2_100cm_scaffold_1417_2
unknown

Not on your lists

1121..1648
DNA (528bp) protein (176aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1417_3
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2078..2326)
DNA (249bp) protein (83aa)
UPI0003D1ABD3 related cluster n=1 Tax=unknown RepID=UPI0003D1ABD3
Uncharacterized protein {ECO:0000313|EMBL:ETA68457.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
SR-VP_26_10_2019_2_100cm_scaffold_1417_4
GWA2_WOR_2_47_8_curated, Omnitrophica, Bacteria

Not on your lists

comp(2323..3603)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GJR6_9CYAN
HNH endonuclease
Tax=GWA2_WOR_2_47_8_curated
SR-VP_26_10_2019_2_100cm_scaffold_1417_5
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3610..4776)
DNA (1167bp) protein (389aa)
toxic anion resistance family protein n=1 Tax=Paenibacillus terrigena RepID=UPI00035D80C8
KlaA protein
Tax=BJP_IG2102_Clostridiales_34_350
SR-VP_26_10_2019_2_100cm_scaffold_1417_6
unknown

Not on your lists

comp(4798..5910)
DNA (1113bp) protein (371aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1417_7
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5914..7608)
DNA (1695bp) protein (565aa)
von Willebrand factor type A n=7 Tax=Clostridium thermocellum RepID=A3DK47_CLOTH
von Willebrand factor type A
Tax=BJP_IG2102_Clostridiales_34_350
SR-VP_26_10_2019_2_100cm_scaffold_1417_8
Enterobacteria phage ES18, Caudovirales, Viruses

Not on your lists

comp(7712..8404)
DNA (693bp) protein (231aa)
Gp47 n=1 Tax=Enterobacteria phage ES18 RepID=Q5G8U2_9CAUD
Gp47 {ECO:0000313|EMBL:AAW70518.1}; TaxID=101570 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Enterobacteria phage ES18.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1417_9
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8479..9252)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LZ48_CLOCD
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
SR-VP_26_10_2019_2_100cm_scaffold_1417_10
unknown

Not on your lists

comp(9268..9777)
DNA (510bp) protein (170aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1417_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9837..10322)
DNA (486bp) protein (162aa)
Acylphosphatase n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BC81_METIK
Hydrogenase maturation factor {ECO:0000313|EMBL:KCZ71229.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
acylphosphatase
SR-VP_26_10_2019_2_100cm_scaffold_1417_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(10692..12254)
DNA (1563bp) protein (521aa)
Glycosyl transferase, family 39 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II20_KORVE
glycosyl transferase family protein
Glycosyl transferase, family 39 {ECO:0000313|EMBL:ABF43480.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
SR-VP_26_10_2019_2_100cm_scaffold_1417_13
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(12419..12832)
DNA (414bp) protein (138aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
PilT protein domain protein n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZCG2_ANACC
PilT protein domain protein
SR-VP_26_10_2019_2_100cm_scaffold_1417_14
unknown

Not on your lists

comp(12829..13194)
DNA (366bp) protein (122aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1417_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13772..14680)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003722246
Site-specific recombinase XerD {ECO:0000313|EMBL:KCZ72093.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
integrase family protein
SR-VP_26_10_2019_2_100cm_scaffold_1417_16
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(15582..16121)
DNA (540bp) protein (180aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_2_100cm_scaffold_1417_17
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(16180..16587)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX92_FERPA
hypothetical protein
Tax=RBG_16_Chloroflexi_50_9_curated
SR-VP_26_10_2019_2_100cm_scaffold_1417_18
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(16601..17125)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IK38_9PLAN
hemerythrin HHE cation binding domain protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_2_100cm_scaffold_1417_19
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17320..18222)
DNA (903bp) protein (301aa)
Radical SAM domain-containing protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B3G8_CLOA9
radical SAM domain-containing protein
Radical SAM domain-containing protein {ECO:0000313|EMBL:AFS79166.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
SR-VP_26_10_2019_2_100cm_scaffold_1417_20
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18229..18555)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TLU1_METAC
NifB-domain protein, type 2
NifB-domain protein, type 2 {ECO:0000313|EMBL:AKB47142.1}; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. Kolksee.;"
SR-VP_26_10_2019_2_100cm_scaffold_1417_21
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18639..18959)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LXF0_THEPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV12659.1}; TaxID=1089553 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
SR-VP_26_10_2019_2_100cm_scaffold_1417_22
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19156..20532)
DNA (1377bp) protein (459aa)
Oxidoreductase/nitrogenase component 1 n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SXY7_SYNGF
nitrogenase
Nitrogenase {ECO:0000313|EMBL:AJE02174.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
SR-VP_26_10_2019_2_100cm_scaffold_1417_23
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20576..22210)
DNA (1635bp) protein (545aa)
Nitrogenase n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I9V7_METB6
Nitrogenase vanadium-cofactor synthesis protein VnfE {ECO:0000313|EMBL:AKB14960.1}; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila CHTI-55.;"
Nitrogenase vanadium-cofactor synthesis protein VnfE
SR-VP_26_10_2019_2_100cm_scaffold_1417_24
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22351..23244)
DNA (894bp) protein (298aa)
nitrogenase iron protein (EC:1.18.6.1)
Nitrogenase iron protein {ECO:0000256|HAMAP-Rule:MF_00533}; EC=1.18.6.1 {ECO:0000256|HAMAP-Rule:MF_00533};; Nitrogenase Fe protein {ECO:0000256|HAMAP-Rule:MF_00533}; Nitrogenase component II {ECO:0000256|HAMAP-Rule:MF_00533}; Nitrogenase reductase {ECO:0000256|HAMAP-Rule:MF_00533}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
Nitrogenase iron protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I9W1_METB6
SR-VP_26_10_2019_2_100cm_scaffold_1417_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23270..23503)
DNA (234bp) protein (78aa)
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:KCZ70948.1}; EC=2.8.1.- {ECO:0000313|EMBL:KCZ70948.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI00035E73C1
SirA family protein
SR-VP_26_10_2019_2_100cm_scaffold_1417_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24030..24359)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7IA00_METB6
Uncharacterized protein {ECO:0000313|EMBL:KCZ70277.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1417_27
unknown

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comp(24500..25462)
DNA (963bp) protein (321aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1417_28
unknown

Not on your lists

comp(25475..26263)
DNA (789bp) protein (263aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1417_29
unknown

Not on your lists

comp(26585..26779)
DNA (195bp) protein (65aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1417_30
unknown

Not on your lists

comp(26943..27137)
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying 30 items

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