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SR-VP_26_10_2019_2_100cm_scaffold_3415

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_3415_1
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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2..448
DNA (447bp) protein (149aa)
3-isopropylmalate dehydrogenase {ECO:0000256|RuleBase:RU004445, ECO:0000256|SAAS:SAAS00089855}; EC=1.1.1.85 {ECO:0000256|RuleBase:RU004445, ECO:0000256|SAAS:SAAS00089855};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
3-isopropylmalate dehydrogenase n=1 Tax=Psychromonas hadalis RepID=UPI0003B7602E
3-isopropylmalate dehydrogenase
SR-VP_26_10_2019_2_100cm_scaffold_3415_2
RIFCSPHIGHO2_02_FULL_RIF_OD1_09_50_13_curated, RIF-OD1-9, Parcubacteria, Bacteria

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432..1046
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0NEQ3_9CLOT
Ham1 family protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_09_50_13_curated
SR-VP_26_10_2019_2_100cm_scaffold_3415_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(1027..1935)
DNA (909bp) protein (303aa)
Ribonuclease Z id=5800107 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNAse Z
Tax=RBG_13_Pacearchaeota_36_9_curated
SR-VP_26_10_2019_2_100cm_scaffold_3415_4
CG_Pacearch_06, Pacearchaeota, Archaea

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2115..2831
DNA (717bp) protein (239aa)
hypothetical protein
Tax=CG_Pacearch_06
SR-VP_26_10_2019_2_100cm_scaffold_3415_5
CG_Pacearch_03, Pacearchaeota, Archaea

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2892..4319
DNA (1428bp) protein (476aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LP13_SYNFM
hypothetical protein
Tax=CG_Pacearch_03
SR-VP_26_10_2019_2_100cm_scaffold_3415_6
unknown

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comp(4647..5210)
DNA (564bp) protein (188aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3415_7
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(5235..5738)
DNA (504bp) protein (168aa)
CMP/dCMP deaminase zinc-binding id=4519301 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
CMP/dCMP deaminase zinc-binding protein
Tax=GWF2_Bacteroidetes_35_48_curated
SR-VP_26_10_2019_2_100cm_scaffold_3415_8
unknown

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comp(5828..6022)
DNA (195bp) protein (65aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3415_9
unknown

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comp(6019..6291)
DNA (273bp) protein (91aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3415_10
unknown

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comp(6393..6617)
DNA (225bp) protein (75aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3415_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6631..7041)
DNA (411bp) protein (137aa)
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KCZ70762.1}; EC=3.6.1.- {ECO:0000313|EMBL:KCZ70762.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ADP-ribose pyrophosphatase (EC:3.6.1.13)
MutT-like protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46E41_METBF
SR-VP_26_10_2019_2_100cm_scaffold_3415_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7100..7708)
DNA (609bp) protein (203aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5W4_METEZ
imidazole glycerol phosphate synthase glutamine amidotransferase subunit
SR-VP_26_10_2019_2_100cm_scaffold_3415_13
unknown

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comp(7780..8883)
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CCA3F
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3415_14
unknown

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comp(8940..9152)
DNA (213bp) protein (71aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3415_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9186..9599)
DNA (414bp) protein (138aa)
Mov34/MPN/PAD-1 family protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAL8_METMS
Putative metal-dependent protease of the PAD1/JAB1 superfamily {ECO:0000313|EMBL:KCZ71755.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Mov34/MPN/PAD-1 family protein
SR-VP_26_10_2019_2_100cm_scaffold_3415_16
unknown

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comp(9712..10449)
DNA (738bp) protein (246aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3415_17
RBG_16_Chloroflexi_47_49_curated, Chloroflexi, Bacteria

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comp(10691..11521)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI0003669B19
hypothetical protein
Tax=RBG_16_Chloroflexi_47_49_curated
SR-VP_26_10_2019_2_100cm_scaffold_3415_18
unknown

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comp(11621..12073)
DNA (453bp) protein (151aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3415_19
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12074..13567)
DNA (1494bp) protein (498aa)
Transposase, IS605 OrfB family n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMF9_METH6
Transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:AET64454.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
SR-VP_26_10_2019_2_100cm_scaffold_3415_20
unknown

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comp(13578..13724)
DNA (147bp) protein (49aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3415_21
unknown

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comp(13867..14037)
DNA (171bp) protein (57aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3415_22
unknown

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comp(14075..14590)
DNA (516bp) protein (172aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3415_23
unknown

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comp(14621..14815)
DNA (195bp) protein (65aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3415_24
unknown

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comp(14863..15255)
DNA (393bp) protein (131aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3415_25
unknown

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comp(15262..15450)
DNA (189bp) protein (63aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3415_26
unknown

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comp(15506..15586)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 26 items

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