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SRVP18_trench_6_60cm_scaffold_1111

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SRVP18_trench_6_60cm_scaffold_1111_1
unknown

Not on your lists

comp(1..279)
DNA (279bp) protein (93aa)

This feature has no annotations

SRVP18_trench_6_60cm_scaffold_1111_2
unknown

Not on your lists

comp(257..1141)
DNA (885bp) protein (295aa)

This feature has no annotations

SRVP18_trench_6_60cm_scaffold_1111_3
unknown

Not on your lists

comp(1366..1986)
DNA (621bp) protein (207aa)

This feature has no annotations

SRVP18_trench_6_60cm_scaffold_1111_4
unknown

Not on your lists

comp(2288..3394)
DNA (1107bp) protein (369aa)
Marine sediment metagenome DNA, contig: S01H1_L05969 {ECO:0000313|EMBL:GAF69391.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
MscS Mechanosensitive ion channel id=5093976 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
mechanosensitive ion channel protein MscS
SRVP18_trench_6_60cm_scaffold_1111_5
unknown

Not on your lists

comp(3425..4507)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CCA3F
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_1111_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4610..4903)
DNA (294bp) protein (98aa)
Sec-independent protein translocase protein TatA n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BF46_9EURY
Sec-independent protein translocase TatA {ECO:0000313|EMBL:KCZ70456.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Sec-independent protein translocase TatA
SRVP18_trench_6_60cm_scaffold_1111_7
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

Not on your lists

comp(4938..5351)
DNA (414bp) protein (138aa)
Putative signal transduction protein with CBS domains n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L700_KORCO
signal transduction protein
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:ACB08229.1}; TaxID=374847 species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
SRVP18_trench_6_60cm_scaffold_1111_8
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(5364..6791)
DNA (1428bp) protein (476aa)
ParB-like partition protein n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V9C4_THELD
parB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:AER67584.1}; TaxID=580340 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314).;"
SRVP18_trench_6_60cm_scaffold_1111_9
unknown

Not on your lists

comp(6788..6979)
DNA (192bp) protein (64aa)

This feature has no annotations

SRVP18_trench_6_60cm_scaffold_1111_10
unknown

Not on your lists

comp(7122..7421)
DNA (300bp) protein (100aa)

This feature has no annotations

SRVP18_trench_6_60cm_scaffold_1111_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(7411..9942)
DNA (2532bp) protein (844aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMZ5_METZD
SRVP18_trench_6_60cm_scaffold_1111_12
unknown

Not on your lists

comp(9976..10254)
DNA (279bp) protein (93aa)

This feature has no annotations

SRVP18_trench_6_60cm_scaffold_1111_13
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10368..10541)
DNA (174bp) protein (58aa)
Ferredoxin n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IA62_METCZ
Ferredoxin
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SRVP18_trench_6_60cm_scaffold_1111_14
unknown

Not on your lists

comp(10568..11092)
DNA (525bp) protein (175aa)

This feature has no annotations

SRVP18_trench_6_60cm_scaffold_1111_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11147..11653)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FJB3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KCZ73456.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
protein of unknown function (DUF350)
SRVP18_trench_6_60cm_scaffold_1111_16
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11785..12414)
DNA (630bp) protein (210aa)
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208};; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
Orotate phosphoribosyltransferase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8V4_METEZ
SRVP18_trench_6_60cm_scaffold_1111_17
CG_CPR03_02, CG_CPR03, Bacteria

Not on your lists

comp(12411..13397)
DNA (987bp) protein (329aa)
Tax=CG_CPR03_02
SRVP18_trench_6_60cm_scaffold_1111_18
unknown

Not on your lists

comp(13413..13631)
DNA (219bp) protein (73aa)

This feature has no annotations

SRVP18_trench_6_60cm_scaffold_1111_19
unknown

Not on your lists

comp(13640..14737)
DNA (1098bp) protein (366aa)

This feature has no annotations

SRVP18_trench_6_60cm_scaffold_1111_20
unknown

Not on your lists

comp(14794..15099)
DNA (306bp) protein (102aa)

This feature has no annotations

SRVP18_trench_6_60cm_scaffold_1111_21
unknown

Not on your lists

comp(15153..15923)
DNA (771bp) protein (257aa)
id=5102789 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
SRVP18_trench_6_60cm_scaffold_1111_22
unknown

Not on your lists

comp(16044..16469)
DNA (426bp) protein (142aa)

This feature has no annotations

SRVP18_trench_6_60cm_scaffold_1111_23
unknown

Not on your lists

comp(16466..16678)
DNA (213bp) protein (71aa)

This feature has no annotations

SRVP18_trench_6_60cm_scaffold_1111_24
unknown

Not on your lists

comp(16722..17570)
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D243_METSW
Uncharacterized protein {ECO:0000313|EMBL:KKM63837.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SRVP18_trench_6_60cm_scaffold_1111_25
unknown

Not on your lists

comp(17701..18021)
DNA (321bp) protein (107aa)

This feature has no annotations

SRVP18_trench_6_60cm_scaffold_1111_26
unknown

Not on your lists

comp(18145..18495)
DNA (351bp) protein (117aa)

This feature has no annotations

SRVP18_trench_6_60cm_scaffold_1111_27
unknown

Not on your lists

comp(18536..18805)
DNA (270bp) protein (90aa)

This feature has no annotations

SRVP18_trench_6_60cm_scaffold_1111_28
unknown

Not on your lists

comp(18846..19484)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KVW9_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_1111_29
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(19576..20787)
DNA (1212bp) protein (404aa)
id=4677371 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RBG_13_Pacearchaeota_36_9_curated
SRVP18_trench_6_60cm_scaffold_1111_30
unknown

Not on your lists

comp(20742..20939)
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 30 items

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