ggKbase home page

BSR_Ace_LFCR_na_p_184670

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_LFCR_na_p_184670_1
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..1065)
DNA (1065bp) protein (355aa)
Ribonucleoside-triphosphate reductase class III catalytic subunit n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EN74_9BACE
ribonucleoside triphosphate reductase
Ribonucleoside triphosphate reductase {ECO:0000313|EMBL:AHF12680.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
BSR_Ace_LFCR_na_p_184670_2
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1430..2080)
DNA (651bp) protein (217aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=3 Tax=Parabacteroides RepID=K5YQX5_9PORP
Uracil phosphoribosyltransferase {ECO:0000313|EMBL:KKB53571.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
BSR_Ace_LFCR_na_p_184670_3
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2200..3723)
DNA (1524bp) protein (508aa)
PDZ domain protein n=4 Tax=Bacteroidales RepID=A6LBD9_PARD8
PDZ domain-containing protein
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:EFK62296.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
BSR_Ace_LFCR_na_p_184670_4
unknown

Not on your lists

3771..3872
DNA (102bp) protein (34aa)

This feature has no annotations

BSR_Ace_LFCR_na_p_184670_5
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3844..4428
DNA (585bp) protein (195aa)
Protein GrpE n=5 Tax=Bacteroidales RepID=D7ITZ4_9BACE
molecular chaperon GrpE protein
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
BSR_Ace_LFCR_na_p_184670_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4445..5602
DNA (1158bp) protein (386aa)
Chaperone protein DnaJ n=2 Tax=Parabacteroides merdae RepID=A7AGC0_9PORP
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
chaperone protein DnaJ
BSR_Ace_LFCR_na_p_184670_7
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5716..5841
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5Z7G4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07065.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
BSR_Ace_LFCR_na_p_184670_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5971..6519
DNA (549bp) protein (183aa)
FHA domain protein n=3 Tax=Parabacteroides RepID=B7B4V3_9PORP
FHA domain protein {ECO:0000313|EMBL:EEC98542.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
BSR_Ace_LFCR_na_p_184670_9
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6558..7265)
DNA (708bp) protein (236aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9GSB0_9BACE
Pilus assembly protein Flp/PilA {ECO:0000313|EMBL:EOA57854.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
hypothetical protein
BSR_Ace_LFCR_na_p_184670_10
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7406..8401)
DNA (996bp) protein (332aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2C3_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78867.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
BSR_Ace_LFCR_na_p_184670_11
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8734..9285
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B6E6DE
Uncharacterized protein {ECO:0000313|EMBL:KIA90422.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
BSR_Ace_LFCR_na_p_184670_12
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9575..11473)
DNA (1899bp) protein (633aa)
Long-chain acyl-CoA synthetase n=2 Tax=Parabacteroides RepID=N2AUY7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB54087.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
long-chain-fatty-acid-CoA ligase
BSR_Ace_LFCR_na_p_184670_13
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11520..14885)
DNA (3366bp) protein (1122aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Transcription-repair-coupling factor n=2 Tax=root RepID=D0T9R3_9BACE
transcription-repair coupling factor
BSR_Ace_LFCR_na_p_184670_14
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14945..15685
DNA (741bp) protein (247aa)
Glycosyl transferase, group 2 family n=3 Tax=Bacteroidales RepID=D7ITU9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN29314.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
glycosyltransferase family dolichyl-phosphate beta-D-mannosyltransferase
BSR_Ace_LFCR_na_p_184670_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15710..17056
DNA (1347bp) protein (449aa)
dihydroorotase (EC:3.5.2.3)
Dihydroorotase, multifunctional complex type n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZTF9_9PORP
Dihydroorotase {ECO:0000256|SAAS:SAAS00252556}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
BSR_Ace_LFCR_na_p_184670_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17309..18181
DNA (873bp) protein (291aa)
Transcriptional regulator, AraC family n=2 Tax=Parabacteroides RepID=C7XCG7_9PORP
transcriptional regulator
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS58177.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
BSR_Ace_LFCR_na_p_184670_17
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18267..18695
DNA (429bp) protein (143aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SUE3_CLOC7
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding {ECO:0000313|EMBL:ADL52898.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
BSR_Ace_LFCR_na_p_184670_18
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18703..19098
DNA (396bp) protein (132aa)
Putative uncharacterized protein id=1770998 bin=GWD2_Bacteroidetes_33_33 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
hypothetical protein
Tax=GWD2_Bacteroidetes_33_33_curated
BSR_Ace_LFCR_na_p_184670_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19154..20992
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LJ90_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAH05786.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
BSR_Ace_LFCR_na_p_184670_20
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21087..21989
DNA (903bp) protein (301aa)
TonB family domain protein n=1 Tax=Bacteroides sp. CAG:443 RepID=R6MTP0_9BACE
TonB family domain protein {ECO:0000313|EMBL:CDB99254.1}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:443.;"
hypothetical protein
BSR_Ace_LFCR_na_p_184670_21
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22303..23868
DNA (1566bp) protein (522aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6AEN8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32116.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
large exoprotein involved in heme utilization or adhesion
BSR_Ace_LFCR_na_p_184670_22
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24151..25242)
DNA (1092bp) protein (364aa)
ribosomal RNA pseudouridine synthase n=1 Tax=Pontibacter roseus RepID=UPI000380D430
pseudouridine synthase
Pseudouridine synthase {ECO:0000313|EMBL:AKD05135.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
BSR_Ace_LFCR_na_p_184670_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25459..25893)
DNA (435bp) protein (145aa)
Ribose-5-phosphate isomerase B n=2 Tax=Parabacteroides merdae RepID=A7AFX1_9PORP
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EDN86027.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ribose 5-phosphate isomerase B
BSR_Ace_LFCR_na_p_184670_24
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25890..27956)
DNA (2067bp) protein (689aa)
Transketolase, thiamine diphosphate binding domain protein n=2 Tax=Parabacteroides RepID=B7B821_9PORP
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:EEC97417.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
transketolase
BSR_Ace_LFCR_na_p_184670_25
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28149..28532
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PHX1_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD56421.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
BSR_Ace_LFCR_na_p_184670_26
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28536..29306
DNA (771bp) protein (257aa)
UPF0246 protein BSIG_2801 n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IM30_9BACE
UPF0246 protein BSIG_2801 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
Displaying 26 items

View Taxonomy