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BSR_Ace_UAPBR_effluent_at_73502

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_effluent_at_73502_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..247
DNA (246bp) protein (82aa)
translation elongation factor Tu n=1 Tax=Rhizobium mongolense RepID=UPI0003B5D699
tuf; elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
BSR_Ace_UAPBR_effluent_at_73502_trna_1
unknown

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866..938
DNA (73bp)
transferRNA Trp
BSR_Ace_UAPBR_effluent_at_73502_2
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1090..1290
DNA (201bp) protein (67aa)
Protein translocase subunit SecE n=1 Tax=Rhizobium sp. CF142 RepID=J2B0A2_9RHIZ
secE; putative preprotein translocase subunit secE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
BSR_Ace_UAPBR_effluent_at_73502_3
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1300..1836
DNA (537bp) protein (179aa)
Transcription termination/antitermination protein NusG n=3 Tax=Agrobacterium RepID=F0L7E8_AGRSH
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
nusG; transcription antitermination protein NusG
BSR_Ace_UAPBR_effluent_at_73502_4
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1982..2413
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=RL11_AGRVS
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
BSR_Ace_UAPBR_effluent_at_73502_5
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2416..3114
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=1 Tax=Rhizobium sp. RepID=L0NEA0_RHISP
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
rplA; 50S ribosomal protein L1
BSR_Ace_UAPBR_effluent_at_73502_6
unknown

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comp(3036..3290)
DNA (255bp) protein (85aa)

This feature has no annotations

BSR_Ace_UAPBR_effluent_at_73502_7
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3417..3974
DNA (558bp) protein (186aa)
50S ribosomal protein L10 n=3 Tax=Rhizobium fredii RepID=C3MAX0_RHISN
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
BSR_Ace_UAPBR_effluent_at_73502_8
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4035..4409
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=2 Tax=Rhizobium fredii RepID=G9A4S1_RHIFH
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
rplL; 50S ribosomal protein L7/L12
BSR_Ace_UAPBR_effluent_at_73502_9
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4658..8797
DNA (4140bp) protein (1380aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
rpoB; RNA polymerase, beta subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037E8950
BSR_Ace_UAPBR_effluent_at_73502_10
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9045..10700
DNA (1656bp) protein (552aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=RPOC_SINMW
DNA-directed RNA polymerase subunit beta'
Displaying 11 items

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