ggKbase home page
Advanced Search
Search Help

BSR_Ace_UAPBR_effluent_at_Rhizobiales_62_14

In projects: BSR_Ace_UAPBR_effluent_at  |  Biological_sulphate_reduction_analysis

Consensus taxonomy: Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: BSR_Ace_UAPBR_effluent_at_UNK

Properties

Avg. coverage: 13.65 Longest contig: 371.15 Kbp Bin length: 3.86 Mbp GC content: 62.45 %
Contigs count: 67 Features count: 3753 rRNAs count: 0 tRNAs count: 42

Genome completeness

near complete RP 45 / 55 BSCG 51 / 51 MC: 1 ASCG 13 / 38

Description

MC is 2 different genes!

Displaying items 1-50 of 67 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
BSR_Ace_UAPBR_effluent_at_26604
Order: Rhizobiales (60%)
5 2691 bp 61.61 11.54 86.18
BSR_Ace_UAPBR_effluent_at_129149
Order: Rhizobiales (75%)
8 7760 bp 59.81 11.71 85.21
BSR_Ace_UAPBR_effluent_at_156707
Order: Rhizobiales (100%)
7 8268 bp 63.67 11.76 91.73
BSR_Ace_UAPBR_effluent_at_69407
Order: Rhizobiales (50%)
6 3634 bp 59.91 11.89 90.97
BSR_Ace_UAPBR_effluent_at_111431
Order: Rhizobiales (100%)
7 8379 bp 59.05 12.05 84.53
BSR_Ace_UAPBR_effluent_at_124707
Genus: Rhizobium (57.14%)
7 6198 bp 57.63 12.12 86.74
BSR_Ace_UAPBR_effluent_at_70986
Genus: Rhizobium (50%)
54 55116 bp 61.83 12.31 89.10
BSR_Ace_UAPBR_effluent_at_60906
Order: Rhizobiales (69.11%)
123 117102 bp 63.83 12.34 86.89
BSR_Ace_UAPBR_effluent_at_21448
Order: Rhizobiales (82.35%)
17 17861 bp 61.17 12.38 81.79
BSR_Ace_UAPBR_effluent_at_70969
Order: Rhizobiales (89.87%)
158 164434 bp 62.04 12.44 89.16
BSR_Ace_UAPBR_effluent_at_69560
Order: Rhizobiales (91.49%)
47 36542 bp 61.04 12.53 86.12
BSR_Ace_UAPBR_effluent_at_41422
Order: Rhizobiales (83.33%)
30 34877 bp 61.98 12.58 90.48
BSR_Ace_UAPBR_effluent_at_109335
Genus: Rhizobium (50%)
22 22779 bp 61.77 12.59 89.00
BSR_Ace_UAPBR_effluent_at_22154
Genus: Rhizobium (52.33%)
86 74745 bp 63.28 12.71 85.87
BSR_Ace_UAPBR_effluent_at_122398
Order: Rhizobiales (92.78%)
97 95993 bp 62.02 12.75 88.02
BSR_Ace_UAPBR_effluent_at_30535
Order: Rhizobiales (52.38%)
21 20674 bp 61.71 12.76 91.26
BSR_Ace_UAPBR_effluent_at_162122
Order: Rhizobiales (90.14%)
71 78892 bp 62.32 12.80 90.26
BSR_Ace_UAPBR_effluent_at_66197
Order: Rhizobiales (85.71%)
21 23180 bp 62.30 12.81 93.30
BSR_Ace_UAPBR_effluent_at_161355
Species: Ochrobactrum sp. CDB2 (60%)
15 14435 bp 61.70 12.82 88.08
BSR_Ace_UAPBR_effluent_at_152689
Order: Rhizobiales (96.88%)
64 68518 bp 63.32 12.86 89.78
BSR_Ace_UAPBR_effluent_at_48561
Genus: Agrobacterium (50%)
14 18882 bp 64.22 13.03 91.70
BSR_Ace_UAPBR_effluent_at_112965
Species: Shinella sp. DD12 (50%)
4 4028 bp 59.91 13.03 86.40
BSR_Ace_UAPBR_effluent_at_106726
Order: Rhizobiales (87.04%)
108 113747 bp 62.14 13.05 89.94
BSR_Ace_UAPBR_effluent_at_39166
Order: Rhizobiales (82.89%)
187 200243 bp 62.84 13.05 90.70
BSR_Ace_UAPBR_effluent_at_42525
Order: Rhizobiales (88.24%)
153 148555 bp 62.14 13.06 89.44
BSR_Ace_UAPBR_effluent_at_17775
Genus: Rhizobium (55.84%)
77 76590 bp 62.07 13.11 89.33
BSR_Ace_UAPBR_effluent_at_75330
Genus: Rhizobium (60%)
5 4449 bp 58.13 13.15 79.55
BSR_Ace_UAPBR_effluent_at_116905
Order: Rhizobiales (64.41%)
59 58223 bp 62.77 13.17 90.76
BSR_Ace_UAPBR_effluent_at_9192
Order: Rhizobiales (80.33%)
61 77497 bp 63.41 13.23 91.29
BSR_Ace_UAPBR_effluent_at_143577
Order: Rhizobiales (90%)
30 33946 bp 63.40 13.34 91.87
BSR_Ace_UAPBR_effluent_at_53271
Order: Rhizobiales (73.17%)
41 43798 bp 63.77 13.39 90.10
BSR_Ace_UAPBR_effluent_at_92320
Order: Rhizobiales (64.58%)
96 102844 bp 62.26 13.40 88.71
BSR_Ace_UAPBR_effluent_at_52562
Order: Rhizobiales (80%)
50 53209 bp 61.33 13.40 85.93
BSR_Ace_UAPBR_effluent_at_149432
Order: Rhizobiales (86.76%)
68 65707 bp 62.04 13.41 88.40
BSR_Ace_UAPBR_effluent_at_104734
Order: Rhizobiales (60%)
15 10211 bp 61.09 13.44 81.85
BSR_Ace_UAPBR_effluent_at_63471
Order: Rhizobiales (90.91%)
341 371148 bp 62.89 13.47 89.21
BSR_Ace_UAPBR_effluent_at_37259
Order: Rhizobiales (86.27%)
51 54028 bp 62.73 13.50 87.71
BSR_Ace_UAPBR_effluent_at_124951
Genus: Agrobacterium (50%)
4 4344 bp 60.38 13.57 90.81
BSR_Ace_UAPBR_effluent_at_93917
Order: Rhizobiales (54.55%)
44 39587 bp 62.09 13.59 90.92
BSR_Ace_UAPBR_effluent_at_38081
Order: Rhizobiales (53.45%)
58 56155 bp 62.71 13.68 91.00
BSR_Ace_UAPBR_effluent_at_63296
Order: Rhizobiales (80.77%)
26 25766 bp 57.64 13.70 87.77
BSR_Ace_UAPBR_effluent_at_72701
Order: Rhizobiales (82.61%)
23 22801 bp 64.31 13.71 92.59
BSR_Ace_UAPBR_effluent_at_60899
Order: Rhizobiales (93.1%)
87 93056 bp 63.69 13.72 89.91
BSR_Ace_UAPBR_effluent_at_139433
Genus: Ochrobactrum (50%)
6 3157 bp 61.64 13.78 88.57
BSR_Ace_UAPBR_effluent_at_98325
Order: Rhizobiales (75%)
4 3718 bp 59.47 13.80 79.64
BSR_Ace_UAPBR_effluent_at_86181
Order: Rhizobiales (75%)
28 32648 bp 59.51 13.88 84.62
BSR_Ace_UAPBR_effluent_at_126974
Species: Shinella sp. DD12 (100%)
2 1056 bp 64.58 13.92 90.34
BSR_Ace_UAPBR_effluent_at_5506
Order: Rhizobiales (58.7%)
138 145666 bp 63.63 13.94 94.48
BSR_Ace_UAPBR_effluent_at_73502
Order: Rhizobiales (81.82%)
11 10701 bp 59.78 13.95 85.71
BSR_Ace_UAPBR_effluent_at_158086
Order: Rhizobiales (91.67%)
36 35469 bp 62.30 13.98 88.89
Displaying items 1-50 of 67 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.