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BSR_Ace_UAPBR_effluent_p_71149

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_effluent_p_71149_1
Clostridium sp. CAG:1219, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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156..461
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B3 RepID=N9ZYC6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ56338.1}; TaxID=1262772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1219.;"
BSR_Ace_UAPBR_effluent_p_71149_2
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(604..1617)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N2T2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34318.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_p_71149_3
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1744..2610
DNA (867bp) protein (289aa)
Transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U926_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:EKQ52824.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
transcriptional regulator LysR family
BSR_Ace_UAPBR_effluent_p_71149_4
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2800..3714
DNA (915bp) protein (305aa)
Ornithine cyclodeaminase n=1 Tax=Brevibacillus panacihumi W25 RepID=V6MC46_9BACL
Ornithine cyclodeaminase {ECO:0000313|EMBL:EST55832.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_p_71149_5
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3945..5162
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7I8S3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE46917.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_p_71149_trna_8
unknown

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comp(5212..5284)
DNA (73bp)
transferRNA Thr
BSR_Ace_UAPBR_effluent_p_71149_trna_7
unknown

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comp(5290..5363)
DNA (74bp)
transferRNA Asp
BSR_Ace_UAPBR_effluent_p_71149_trna_6
unknown

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comp(5370..5442)
DNA (73bp)
transferRNA Trp
BSR_Ace_UAPBR_effluent_p_71149_6
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5736..6176)
DNA (441bp) protein (147aa)
FeS cluster assembly scaffold protein NifU Clostridium type n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7AYH6_9FIRM
Nitrogen fixation protein NifU {ECO:0000313|EMBL:KJF41607.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
FeS cluster assembly scaffold protein NifU, Clostridium type
BSR_Ace_UAPBR_effluent_p_71149_7
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6239..7372)
DNA (1134bp) protein (378aa)
Cysteine desulfurase NifS n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYU6_9FIRM
Cysteine desulfurase {ECO:0000313|EMBL:KJF41565.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
class V aminotransferase
BSR_Ace_UAPBR_effluent_p_71149_8
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7804..8244)
DNA (441bp) protein (147aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6C9E2_9FIRM
BSR_Ace_UAPBR_effluent_p_71149_9
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8716..10770
DNA (2055bp) protein (685aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64618.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_p_71149_10
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11011..12978
DNA (1968bp) protein (656aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64617.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain
BSR_Ace_UAPBR_effluent_p_71149_11
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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13014..13457
DNA (444bp) protein (148aa)
50S ribosomal protein L9 n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYU2_9FIRM
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
50S ribosomal protein L9
BSR_Ace_UAPBR_effluent_p_71149_12
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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13465..14901
DNA (1437bp) protein (479aa)
primary replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYU1_9FIRM
DNA helicase {ECO:0000313|EMBL:KJF41562.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
BSR_Ace_UAPBR_effluent_p_71149_13
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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14888..16279
DNA (1392bp) protein (464aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYU0_9FIRM
BSR_Ace_UAPBR_effluent_p_71149_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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16279..16827
DNA (549bp) protein (183aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYT9_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EHL64613.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
BSR_Ace_UAPBR_effluent_p_71149_15
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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16890..19022
DNA (2133bp) protein (711aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
membrane protease FtsH catalytic subunit (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYT8_9FIRM
BSR_Ace_UAPBR_effluent_p_71149_16
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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19265..21244
DNA (1980bp) protein (660aa)
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit (EC:5.99.1.3)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZ61_9FIRM
DNA topoisomerase {ECO:0000313|EMBL:KJF41099.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
BSR_Ace_UAPBR_effluent_p_71149_17
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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21299..23539
DNA (2241bp) protein (747aa)
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZ60_9FIRM
Topoisomerase IV {ECO:0000313|EMBL:KJF41098.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
BSR_Ace_UAPBR_effluent_p_71149_18
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23578..24111
DNA (534bp) protein (178aa)
group-specific protein
Uncharacterized protein {ECO:0000313|EMBL:KIE44740.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
BSR_Ace_UAPBR_effluent_p_71149_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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24239..24487
DNA (249bp) protein (83aa)
Preprotein translocase, SecG subunit n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZ58_9FIRM
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EHL63942.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
protein translocase, SecG subunit
BSR_Ace_UAPBR_effluent_p_71149_20
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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24679..26829
DNA (2151bp) protein (717aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZ57_9FIRM
BSR_Ace_UAPBR_effluent_p_71149_21
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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27351..28115
DNA (765bp) protein (255aa)
Sporulation transcription factor Spo0A n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RSS8_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
BSR_Ace_UAPBR_effluent_p_71149_22
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28385..29368)
DNA (984bp) protein (328aa)
putative aminopeptidase ybaC (EC:3.4.11.-)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RN95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF41000.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
BSR_Ace_UAPBR_effluent_p_71149_23
unknown

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29585..29929
DNA (345bp) protein (115aa)

This feature has no annotations

BSR_Ace_UAPBR_effluent_p_71149_24
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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29941..31089
DNA (1149bp) protein (383aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:2.7.7.60 4.6.1.12)
Bifunctional enzyme IspD/IspF n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RST4_9FIRM
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
BSR_Ace_UAPBR_effluent_p_71149_25
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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31215..32171
DNA (957bp) protein (319aa)
TIGR00159 family protein (Fragment) n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RST5_9FIRM
TIGR00159 family protein {ECO:0000313|EMBL:EHL71194.1}; Flags: Fragment;; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
conserved hypothetical protein TIGR00159
BSR_Ace_UAPBR_effluent_p_71149_26
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32152..33453
DNA (1302bp) protein (434aa)
YbbR-like protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2EMN1_CLOS4
YbbR-like protein {ECO:0000313|EMBL:ERI96002.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
BSR_Ace_UAPBR_effluent_p_71149_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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33488..35062
DNA (1575bp) protein (525aa)
FAD dependent oxidoreductase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H6M3_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:EEU96551.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Uncharacterized FAD-dependent dehydrogenases
Displaying items 1-30 of 105 in total

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