ggKbase home page

BSR_Ace_UAPBR_effluent_p_2_52474

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_effluent_p_2_52474_1
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1394
DNA (1392bp) protein (464aa)
UPF0061 protein Tint_1494 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X180_THIK1
hypothetical protein
UPF0061 protein Tint_1494 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
BSR_Ace_UAPBR_effluent_p_2_52474_2
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1406..1840
DNA (435bp) protein (145aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
msrB; Peptide methionine sulfoxide reductase msrB (Peptide-methionine (R)-S-oxide reductase) (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CTE1_THIA3
BSR_Ace_UAPBR_effluent_p_2_52474_3
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1804..2823)
DNA (1020bp) protein (340aa)
Manno(Fructo)kinase {ECO:0000313|EMBL:CDW95784.1}; EC=2.7.1.4 {ECO:0000313|EMBL:CDW95784.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
ROK family protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X182_THIK1
ROK family protein
BSR_Ace_UAPBR_effluent_p_2_52474_4
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2896..3414)
DNA (519bp) protein (173aa)
N-acetyltransferase GCN5 n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002625487
N-acetyltransferase GCN5
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
BSR_Ace_UAPBR_effluent_p_2_52474_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3365..3688)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002625486
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
BSR_Ace_UAPBR_effluent_p_2_52474_6
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3761..6364)
DNA (2604bp) protein (868aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6X9Q3_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO78416.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_p_2_52474_7
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6348..7952)
DNA (1605bp) protein (535aa)
Restriction-modification system, putative endonuclease n=1 Tax=Thauera sp. 63 RepID=N6Y7N0_9RHOO
Eco57I restriction-modification methylase {ECO:0000313|EMBL:GAO34187.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
restriction-modification system, putative endonuclease
BSR_Ace_UAPBR_effluent_p_2_52474_8
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8168..8770)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YG09_9DELT
hypothetical protein
Tax=CG_Rhodof_03
BSR_Ace_UAPBR_effluent_p_2_52474_9
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8773..9501)
DNA (729bp) protein (243aa)
Type III restriction system methylase n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GDH6_NITSI
type III restriction system methylase
Type III restriction system methylase {ECO:0000313|EMBL:AEJ03182.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
BSR_Ace_UAPBR_effluent_p_2_52474_10
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9520..11586)
DNA (2067bp) protein (689aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X186_THIK1
BSR_Ace_UAPBR_effluent_p_2_52474_11
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11586..12641)
DNA (1056bp) protein (352aa)
Cell division protein ZipA n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CTE5_THIA3
conserved hypothetical protein; putative exported protein and Cell-division ZipA domain
Cell division protein ZipA {ECO:0000256|RuleBase:RU003612}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
BSR_Ace_UAPBR_effluent_p_2_52474_12
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12676..16203)
DNA (3528bp) protein (1176aa)
Chromosome partition protein Smc n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X188_THIK1
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
chromosome segregation protein SMC
BSR_Ace_UAPBR_effluent_p_2_52474_13
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16337..16978
DNA (642bp) protein (214aa)
endonuclease III (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Endonuclease III n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X189_THIK1
BSR_Ace_UAPBR_effluent_p_2_52474_14
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16975..17880
DNA (906bp) protein (302aa)
Putative ABC-type Fe3+-hydroxamate transport system, periplasmic component n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CTE8_THIA3
Putative ABC-type Fe3+-hydroxamate transport system, periplasmic component
Putative ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:CAZ88567.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
BSR_Ace_UAPBR_effluent_p_2_52474_15
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18164..19744)
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000375D80E
Putative Glucans biosynthesis protein D 2 {ECO:0000313|EMBL:CDI01435.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
periplasmic glucan biosynthesis protein MdoG
BSR_Ace_UAPBR_effluent_p_2_52474_trna_1
unknown

Not on your lists

comp(20298..20385)
DNA (88bp)
transferRNA Ser
BSR_Ace_UAPBR_effluent_p_2_52474_16
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20458..22437)
DNA (1980bp) protein (660aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Acetyl-coenzyme A synthetase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X363_THIK1
acetate/CoA ligase
BSR_Ace_UAPBR_effluent_p_2_52474_17
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22669..24195
DNA (1527bp) protein (509aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X365_THIK1
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit {ECO:0000313|EMBL:ADG31423.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
BSR_Ace_UAPBR_effluent_p_2_52474_18
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24589..25380
DNA (792bp) protein (264aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Glutamate racemase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X367_THIK1
BSR_Ace_UAPBR_effluent_p_2_52474_19
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25716..27230
DNA (1515bp) protein (505aa)
Cytochrome c class I n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X369_THIK1
Cytochrome c class I {ECO:0000313|EMBL:CDW92243.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
cytochrome c class I
BSR_Ace_UAPBR_effluent_p_2_52474_20
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27232..28467
DNA (1236bp) protein (412aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X370_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG31428.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
BSR_Ace_UAPBR_effluent_p_2_52474_21
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28491..28865
DNA (375bp) protein (125aa)
Putative cytochrome c subunit of the sulfide dehydrogenase FccA n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUR8_THIA3
Putative cytochrome c subunit of the sulfide dehydrogenase FccA {ECO:0000313|EMBL:CDW92245.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative cytochrome c subunit of the sulfide dehydrogenase FccA
BSR_Ace_UAPBR_effluent_p_2_52474_22
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28876..30213
DNA (1338bp) protein (446aa)
Sulfide dehydrogenase (Flavocytochrome c) flavoprotein chain {ECO:0000313|EMBL:CDW92246.1}; EC=1.8.2.3 {ECO:0000313|EMBL:CDW92246.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X372_THIK1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
BSR_Ace_UAPBR_effluent_p_2_52474_23
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30210..30968
DNA (759bp) protein (253aa)
Cytochrome c class I n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X373_THIK1
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:ADG31431.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
BSR_Ace_UAPBR_effluent_p_2_52474_24
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30986..31990)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUS1_THIA3
conserved hypothetical protein; putative exported protein; putative TPR repeat
Uncharacterized protein {ECO:0000313|EMBL:CAZ89040.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
BSR_Ace_UAPBR_effluent_p_2_52474_25
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32046..32423)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUS2_THIA3
Uncharacterized protein {ECO:0000313|EMBL:CDW92249.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_p_2_52474_26
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32522..33382)
DNA (861bp) protein (287aa)
Putative Phosphotransferase system, fructose-specific IIC component n=2 Tax=Thiomonas RepID=D6CUS3_THIA3
putative Phosphotransferase system, fructose-specific IIC component
Uncharacterized protein {ECO:0000313|EMBL:CDW92250.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
BSR_Ace_UAPBR_effluent_p_2_52474_27
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33488..34777)
DNA (1290bp) protein (430aa)
Sulfide-quinone reductase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUS4_THIA3
sqr; Sulfide-quinone reductase
Sulfide-quinone reductase {ECO:0000313|EMBL:CAZ89043.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
BSR_Ace_UAPBR_effluent_p_2_52474_28
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35212..35721
DNA (510bp) protein (170aa)
Putative transporter n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUS5_THIA3
putative transporter
Putative transporter {ECO:0000313|EMBL:CAZ89044.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
BSR_Ace_UAPBR_effluent_p_2_52474_29
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35718..36326
DNA (609bp) protein (203aa)
Putative transporter n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUS6_THIA3
putative transporter
Putative transporter {ECO:0000313|EMBL:CAZ89045.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Displaying items 1-30 of 45 in total

View Taxonomy