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BSR_Ace_UAPBR_inlet_at_139947

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_inlet_at_139947_1
unknown

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1..144
DNA (144bp) protein (48aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_at_139947_2
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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157..705
DNA (549bp) protein (183aa)
N utilization substance protein B homolog n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F2F9_SPICH
NusB antitermination factor
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; Flags: Precursor;; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
BSR_Ace_UAPBR_inlet_at_139947_3
GWB1_Spirochaetes_48_6_curated, Spirochaetes, Bacteria

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686..1438
DNA (753bp) protein (251aa)
Methionine aminopeptidase id=1275979 bin=GWE1_Spirochaete_60_18 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
methionine aminopeptidase
Tax=GWB1_Spirochaetes_48_6_curated
BSR_Ace_UAPBR_inlet_at_139947_4
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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1640..3169
DNA (1530bp) protein (510aa)
protease Do (EC:3.4.21.108)
Protease Do n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F3K3_SPICH
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
BSR_Ace_UAPBR_inlet_at_139947_5
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

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3319..3939
DNA (621bp) protein (207aa)
Phosphoribosyl transferase domain protein id=1275981 bin=GWE1_Spirochaete_60_18 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
phosphoribosyl transferase domain-containing protein
Tax=GWB1_Spirochaetes_60_80_curated
BSR_Ace_UAPBR_inlet_at_139947_6
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(3932..5206)
DNA (1275bp) protein (425aa)
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase id=2427045 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
BSR_Ace_UAPBR_inlet_at_139947_7
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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5294..7687
DNA (2394bp) protein (798aa)
Putative ATP-dependent helicase HRQ1 n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YA73_TREAZ
putative ATP-dependent helicase HRQ1
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
BSR_Ace_UAPBR_inlet_at_139947_8
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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7703..9001
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F1R2_SPICH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ19396.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
BSR_Ace_UAPBR_inlet_at_139947_9
GWB1_Spirochaetes_48_6_curated, Spirochaetes, Bacteria

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comp(8985..10040)
DNA (1056bp) protein (352aa)
Probable dual-specificity RNA methyltransferase RlmN id=2537956 bin=GWB1_Spirochaetales_60_80 species=Treponema saccharophilum genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
50S rRNA methyltransferase
Tax=GWB1_Spirochaetes_48_6_curated
BSR_Ace_UAPBR_inlet_at_139947_10
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(10057..11211)
DNA (1155bp) protein (385aa)
Tetratricopeptide TPR_2 repeat-containing protein id=1275987 bin=GWE1_Spirochaete_60_18 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
BSR_Ace_UAPBR_inlet_at_139947_11
GWB1_Spirochaetes_48_6_curated, Spirochaetes, Bacteria

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comp(11360..11902)
DNA (543bp) protein (181aa)
RsmD family RNA methyltransferase n=1 Tax=Treponema medium ATCC 700293 RepID=S3JTC0_TREMD
methyltransferase
Tax=GWB1_Spirochaetes_48_6_curated
BSR_Ace_UAPBR_inlet_at_139947_12
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(11906..12373)
DNA (468bp) protein (156aa)
SsrA-binding protein n=7 Tax=Treponema denticola RepID=SSRP_TREDE
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=699187 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola F0402.;"
BSR_Ace_UAPBR_inlet_at_139947_13
GWB1_Spirochaetes_48_6_curated, Spirochaetes, Bacteria

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comp(12370..13962)
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RSU5_SPITD
hypothetical protein
Tax=GWB1_Spirochaetes_48_6_curated
BSR_Ace_UAPBR_inlet_at_139947_14
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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14029..15018
DNA (990bp) protein (330aa)
Signal peptidase I id=2780865 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
signal peptidase I
Tax=GWC1_Treponema_61_84_curated
BSR_Ace_UAPBR_inlet_at_139947_15
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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15068..15799
DNA (732bp) protein (244aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1125725 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536.;"
Signal peptidase I n=1 Tax=Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 RepID=U2LB29_TRESO
signal peptidase I S
BSR_Ace_UAPBR_inlet_at_139947_16
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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15796..17046
DNA (1251bp) protein (417aa)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GE83_SPITZ
oxygen-independent coproporphyrinogen III oxidase
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:AEJ61436.1}; TaxID=869211 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203).;"
BSR_Ace_UAPBR_inlet_at_139947_17
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

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17087..18358
DNA (1272bp) protein (424aa)
L-fucose isomerase 2 domain protein id=4667218 bin=GWF2_Melioribacter_38_21 species=Halanaerobium praevalens genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2102_Coriobacteriales_64_17
BSR_Ace_UAPBR_inlet_at_139947_18
GWB1_Spirochaetes_48_6_curated, Spirochaetes, Bacteria

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comp(18355..18960)
DNA (606bp) protein (202aa)
Metallo-beta-lactamase family protein id=1275996 bin=GWE1_Spirochaete_60_18 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
metallo-beta-lactamase
Tax=GWB1_Spirochaetes_48_6_curated
BSR_Ace_UAPBR_inlet_at_139947_19
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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comp(18957..19562)
DNA (606bp) protein (202aa)
Pentapeptide repeat protein id=3200184 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
pentapeptide repeat-containing protein
Tax=GWC1_Treponema_61_84_curated
BSR_Ace_UAPBR_inlet_at_139947_20
GWB1_Spirochaetes_48_6_curated, Spirochaetes, Bacteria

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19637..19933
DNA (297bp) protein (99aa)
Uncharacterized protein id=2550416 bin=GWF1_Spirochaetes_60_12 species=Treponema sp. JC4 genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_48_6_curated
BSR_Ace_UAPBR_inlet_at_139947_21
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

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19930..20760
DNA (831bp) protein (277aa)
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase id=2550419 bin=GWF1_Spirochaetes_60_12 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_60_80_curated
BSR_Ace_UAPBR_inlet_at_139947_22
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

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20799..21827
DNA (1029bp) protein (343aa)
Putative ribosome biogenesis GTPase RsgA id=1312224 bin=GWE1_Spirochaete_60_18 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
rsgA; ribosome small subunit-dependent GTPase A
Tax=GWB1_Spirochaetes_60_80_curated
BSR_Ace_UAPBR_inlet_at_139947_23
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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21879..24371
DNA (2493bp) protein (831aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Endonuclease MutS2 n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F0G6_SPICH
MutS2 protein
BSR_Ace_UAPBR_inlet_at_139947_24
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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24512..25246
DNA (735bp) protein (245aa)
Probable transcriptional regulatory protein Spica_1339 n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F2U1_SPICH
hypothetical protein
Probable transcriptional regulatory protein Spica_1339 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
BSR_Ace_UAPBR_inlet_at_139947_25
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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25250..25774
DNA (525bp) protein (175aa)
Holliday junction resolvase RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
Holliday junction resolvase n=1 Tax=Treponema primitia RepID=UPI0002555708
BSR_Ace_UAPBR_inlet_at_139947_26
Treponema phagedenis, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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25879..26433
DNA (555bp) protein (185aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031};; TaxID=162 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema phagedenis.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Treponema phagedenis F0421 RepID=E7NWP4_TREPH
ruvA; Holliday junction DNA helicase RuvA
BSR_Ace_UAPBR_inlet_at_139947_27
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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26430..27485
DNA (1056bp) protein (352aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; Flags: Precursor;; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F2U4_SPICH
Holliday junction ATP-dependent DNA helicase ruvB
BSR_Ace_UAPBR_inlet_at_139947_28
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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27460..28506
DNA (1047bp) protein (349aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase id=2967937 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
Tax=GWC1_Treponema_61_84_curated
BSR_Ace_UAPBR_inlet_at_139947_29
Treponema lecithinolyticum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(28545..29189)
DNA (645bp) protein (215aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1321815 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema lecithinolyticum ATCC 700332.;"
Thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Treponema lecithinolyticum ATCC 700332 RepID=U2KR89_TRELE
BSR_Ace_UAPBR_inlet_at_139947_30
unknown

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29242..30024
DNA (783bp) protein (261aa)

This feature has no annotations

Displaying 30 items

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