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BSR_Ace_UAPBR_inlet_at_113756

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_inlet_at_113756_1
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(1..675)
DNA (675bp) protein (225aa)
50S ribosomal protein L1 id=4015268 bin=GWB1_Spirochaetales_60_80 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
rplA; 50S ribosomal protein L1
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
BSR_Ace_UAPBR_inlet_at_113756_2
Treponema maltophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


comp(672..1109)
DNA (438bp) protein (146aa)
50S ribosomal protein L11 n=1 Tax=Treponema maltophilum ATCC 51939 RepID=S3K271_TREMA
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1125699 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema maltophilum ATCC 51939.;"
50S ribosomal protein L11
BSR_Ace_UAPBR_inlet_at_113756_3
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(1374..1931)
DNA (558bp) protein (186aa)
Transcription termination/antitermination protein NusG n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EX11_SPICH
NusG antitermination factor
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
BSR_Ace_UAPBR_inlet_at_113756_4
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(1944..2126)
DNA (183bp) protein (61aa)
preprotein translocase subunit SecE n=1 Tax=Treponema primitia RepID=UPI0002555586
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
BSR_Ace_UAPBR_inlet_at_113756_trna_2
unknown

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comp(2159..2231)
DNA (73bp)
transferRNA Trp
BSR_Ace_UAPBR_inlet_at_113756_5
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(2299..2472)
DNA (174bp) protein (58aa)
50S ribosomal protein L33 id=3976335 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
50S ribosomal protein L33
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
BSR_Ace_UAPBR_inlet_at_113756_trna_1
unknown

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comp(2535..2607)
DNA (73bp)
transferRNA Thr
BSR_Ace_UAPBR_inlet_at_113756_6
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(2666..4252)
DNA (1587bp) protein (529aa)
integral membrane protein MviN id=3976337 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
mviN; integral membrane protein MviN
Tax=GWC1_Treponema_61_84_curated
BSR_Ace_UAPBR_inlet_at_113756_7
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(4239..5279)
DNA (1041bp) protein (347aa)
Threonine aldolase (EC:4.1.2.5)
Threonine aldolase {ECO:0000313|EMBL:AEJ20815.1}; EC=4.1.2.5 {ECO:0000313|EMBL:AEJ20815.1};; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Threonine aldolase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F125_SPICH
BSR_Ace_UAPBR_inlet_at_113756_8
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

5555..6403
DNA (849bp) protein (283aa)
Cof-like hydrolase id=3976339 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Cof-like hydrolase
Cof-like hydrolase {ECO:0000313|EMBL:AEJ20880.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
BSR_Ace_UAPBR_inlet_at_113756_9
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(6348..7061)
DNA (714bp) protein (238aa)
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LN94_TREBD
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin {ECO:0000313|EMBL:AEE16859.1}; Flags: Precursor;; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
BSR_Ace_UAPBR_inlet_at_113756_10
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

7246..8004
DNA (759bp) protein (253aa)
Putative uncharacterized protein id=3371825 bin=GWA1_Treponema_62_8 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
hypothetical protein
Tax=GWC1_Treponema_61_84_curated
BSR_Ace_UAPBR_inlet_at_113756_11
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8027..9670)
DNA (1644bp) protein (548aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1PDC6_METMZ
Uncharacterized protein {ECO:0000313|EMBL:AKB14798.1}; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila CHTI-55.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_at_113756_12
unknown

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comp(9817..10047)
DNA (231bp) protein (77aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_at_113756_13
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

10665..12605
DNA (1941bp) protein (647aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (Modular protein) n=1 Tax=Mesotoga sp. PhosAc3 PF3_9THEM">RepID=N1JPF3_9THEM
hypothetical protein
Tax=RBG_13_Spirochaetes_68_11_curated
BSR_Ace_UAPBR_inlet_at_113756_14
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(12678..13475)
DNA (798bp) protein (266aa)
Putative uncharacterized protein id=4090127 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_59_5_curated
BSR_Ace_UAPBR_inlet_at_113756_15
Desulfovibrio gigas, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13502..14866)
DNA (1365bp) protein (455aa)
Hydroxypyruvate reductase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QDB7_9DELT
putative glycerate kinase
Putative glycerate kinase {ECO:0000313|EMBL:AGW14176.1}; TaxID=1121448 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio gigas DSM 1382 = ATCC 19364.;"
BSR_Ace_UAPBR_inlet_at_113756_16
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14866..15543)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PUW7_9RHOB
hypothetical protein
Tax=BJP_IG2102_Desulfovibrionales_64_25
BSR_Ace_UAPBR_inlet_at_113756_17
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(15589..16677)
DNA (1089bp) protein (363aa)
Endonuclease/exonuclease/phosphatase id=2543820 bin=GWF1_Spirochaetes_60_12 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
endonuclease/exonuclease/phosphatase family protein
Tax=GWB1_Spirochaetes_60_80_curated
BSR_Ace_UAPBR_inlet_at_113756_18
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(16777..17391)
DNA (615bp) protein (205aa)
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit id=3926169 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
BSR_Ace_UAPBR_inlet_at_113756_19
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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17518..18072
DNA (555bp) protein (185aa)
Thioredoxin id=3926166 bin=GWB1_Spirochaetes_59_5 species=Treponema phagedenis genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
TlpA family thioredoxin-disulfide reductase
Tax=GWB1_Spirochaetes_59_5_curated
BSR_Ace_UAPBR_inlet_at_113756_20
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

18069..19031
DNA (963bp) protein (321aa)
Cytochrome C biogenesis protein transmembrane region id=3926164 bin=GWB1_Spirochaetes_59_5 species=Treponema phagedenis genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Cytochrome c-type biogenesis protein CcdA
Tax=GWB1_Spirochaetes_59_5_curated
BSR_Ace_UAPBR_inlet_at_113756_21
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(19206..20942)
DNA (1737bp) protein (579aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RYM1_SPHGB
ABC transporter inner membrane protein
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:ADY12864.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_Ace_UAPBR_inlet_at_113756_22
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(20939..22069)
DNA (1131bp) protein (377aa)
polyamine-transporting ATPase (EC:3.6.3.31)
Polyamine-transporting ATPase {ECO:0000313|EMBL:ADY12863.1}; EC=3.6.3.31 {ECO:0000313|EMBL:ADY12863.1};; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
Polyamine-transporting ATPase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RYM0_SPHGB
BSR_Ace_UAPBR_inlet_at_113756_23
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

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comp(22252..23232)
DNA (981bp) protein (327aa)
Extracellular solute-binding protein family 1 n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RYL9_SPHGB
extracellular solute-binding protein
Tax=GWC2_Spirochaetes_52_13_curated
BSR_Ace_UAPBR_inlet_at_113756_24
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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23425..24171
DNA (747bp) protein (249aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Glucosamine/galactosamine-6-phosphate isomerase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A2N3_STAND
glucosamine/galactosamine-6-phosphate isomerase
BSR_Ace_UAPBR_inlet_at_113756_25
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(24334..25947)
DNA (1614bp) protein (538aa)
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase {ECO:0000313|EMBL:ADY12866.1}; EC=5.4.2.8 {ECO:0000313|EMBL:ADY12866.1};; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
Phosphomannomutase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RYM3_SPHGB
BSR_Ace_UAPBR_inlet_at_113756_26
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(25944..26918)
DNA (975bp) protein (325aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RYL7_SPHGB
xylose isomerase
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:ADY12860.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_Ace_UAPBR_inlet_at_113756_27
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

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27028..28347
DNA (1320bp) protein (440aa)
Major facilitator superfamily MFS_1 id=2943752 bin=GWF1_Spirochaetes_60_12 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
major facilitator superfamily protein
Tax=GWB1_Spirochaetes_60_80_curated
BSR_Ace_UAPBR_inlet_at_113756_28
Olsenella uli, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28382..28561)
DNA (180bp) protein (60aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A430_DESDJ
methylase
Methyltransferase domain protein {ECO:0000313|EMBL:EUB32562.1}; TaxID=1190621 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella uli MSTE5.;"
Displaying items 1-30 of 37 in total

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