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BSR_Ace_UAPBR_inlet_at_157165

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_inlet_at_157165_1
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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1..654
DNA (654bp) protein (218aa)
putative permease, YjgP/YjgQ family protein id=3718991 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_59_5_curated
BSR_Ace_UAPBR_inlet_at_157165_2
Spirochaeta sp. JC230, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

651..1784
DNA (1134bp) protein (378aa)
Uncharacterized protein {ECO:0000313|EMBL:KGE73968.1}; TaxID=1480694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC230.;"
Permease YjgP/YjgQ family protein id=2427308 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
putative permease
BSR_Ace_UAPBR_inlet_at_157165_3
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

1881..3038
DNA (1158bp) protein (386aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase id=3718987 bin=GWB1_Spirochaetes_59_5 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
BSR_Ace_UAPBR_inlet_at_157165_4
Treponema vincentii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

3019..3606
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Treponema vincentii F0403 RepID=S3L9C6_9SPIO
Uncharacterized protein {ECO:0000313|EMBL:EPF47048.1}; TaxID=1125702 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema vincentii F0403.;"
NlpC (ORF-17)
BSR_Ace_UAPBR_inlet_at_157165_5
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(3650..6334)
DNA (2685bp) protein (895aa)
Transcription elongation factor id=3718979 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
transcription elongation factor GreA
Tax=GWB1_Spirochaetes_59_5_curated
BSR_Ace_UAPBR_inlet_at_157165_6
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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comp(6348..7286)
DNA (939bp) protein (313aa)
Tetratricopeptide TPR_2 repeat-containing protein id=3160807 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
hypothetical protein
Tax=GWC1_Treponema_61_84_curated
BSR_Ace_UAPBR_inlet_at_157165_7
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

7454..8131
DNA (678bp) protein (226aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Ribulose-phosphate 3-epimerase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F3D7_SPICH
BSR_Ace_UAPBR_inlet_at_157165_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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8131..8592
DNA (462bp) protein (154aa)
D-aminoacyl-tRNA deacylase {ECO:0000255|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000255|HAMAP-Rule:MF_00518};; D-tyrosyl-tRNA(Tyr) deacylase; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=DTD_KORVE
D-tyrosyl-tRNA(Tyr) deacylase
BSR_Ace_UAPBR_inlet_at_157165_9
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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comp(8709..11849)
DNA (3141bp) protein (1047aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase id=4172467 bin=GWF2_Lentisphaerae_50_93 species=Treponema vincentii genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=GWF2_Lentisphaerae_50_93_curated
BSR_Ace_UAPBR_inlet_at_157165_10
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

12013..13200
DNA (1188bp) protein (396aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV id=3718912 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
BSR_Ace_UAPBR_inlet_at_157165_11
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(13256..13894)
DNA (639bp) protein (213aa)
Putative uncharacterized protein id=2762996 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
hypothetical protein
Tax=GWC1_Treponema_61_84_curated
BSR_Ace_UAPBR_inlet_at_157165_12
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(13912..14190)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EXQ3_SPICH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ19634.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
BSR_Ace_UAPBR_inlet_at_157165_13
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists


14272..16602
DNA (2331bp) protein (777aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase id=3718900 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_60_80_curated
BSR_Ace_UAPBR_inlet_at_157165_14
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

16599..17738
DNA (1140bp) protein (380aa)
FemAB family protein id=2538576 bin=GWB1_Spirochaetales_60_80 species=Treponema vincentii genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
pentaglycine interpeptide bridge formation protein
Tax=GWB1_Spirochaetes_60_80_curated
BSR_Ace_UAPBR_inlet_at_157165_15
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17719..18273)
DNA (555bp) protein (185aa)
AMMECR1 domain protein n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X0D4_DESRD
AMMECR1 domain-containing protein
AMMECR1 domain protein {ECO:0000313|EMBL:ACV67759.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Desulfohalobium retbaense (strain DSM 5692).;"
BSR_Ace_UAPBR_inlet_at_157165_16
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18289..19140)
DNA (852bp) protein (284aa)
Uncharacterized protein {ECO:0000313|EMBL:KFO67819.1}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCADC.;"
UPF0103/Mediator of ErbB2-driven cell motility-containing protein id=3404878 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
AMMECR1 domain-containing protein
BSR_Ace_UAPBR_inlet_at_157165_17
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

19201..20580
DNA (1380bp) protein (460aa)
Fis family two component sigma-54 specific transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family id=3546397 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
BSR_Ace_UAPBR_inlet_at_157165_18
Mesotoga prima, Mesotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

20691..22376
DNA (1686bp) protein (562aa)
Gamma-glutamyltranspeptidase n=1 Tax=Mesotoga sp. PhosAc3 RepID=N1JPU2_9THEM
gamma-glutamyltranspeptidase
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:AFK07760.1}; Flags: Precursor;; TaxID=660470 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga prima MesG1.Ag.4.2.;"
BSR_Ace_UAPBR_inlet_at_157165_19
unknown

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comp(22401..22568)
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 19 items

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