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BSR_Ace_UAPBR_inlet_p_17428

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_inlet_p_17428_1
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..390)
DNA (390bp) protein (130aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037289AB
D-tyrosyl-tRNA(Tyr) deacylase
BSR_Ace_UAPBR_inlet_p_17428_2
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

650..1480
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036153F5
Uncharacterized protein {ECO:0000313|EMBL:EIT68284.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
lipid A biosynthesis acyltransferase
BSR_Ace_UAPBR_inlet_p_17428_3
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1590..2528
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003693DA5
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:EIT71002.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
ABC-type multidrug transport system, ATPase component
BSR_Ace_UAPBR_inlet_p_17428_4
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2528..3274
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000365E84E
Uncharacterized protein {ECO:0000313|EMBL:EIT71003.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
ABC transporter permease
BSR_Ace_UAPBR_inlet_p_17428_5
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3288..4682
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036F7628
Uncharacterized protein {ECO:0000313|EMBL:EIT71004.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_p_17428_6
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4693..5583
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037A4AD9
Uncharacterized protein {ECO:0000313|EMBL:EIT71005.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_p_17428_7
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5639..6304)
DNA (666bp) protein (222aa)
Probable glutathione S-transferase n=1 Tax=Agarivorans albus MKT 106 RepID=R9PP83_AGAAL
Probable glutathione S-transferase {ECO:0000313|EMBL:GAD03120.1}; TaxID=1331007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans.;" source="Agarivorans albus MKT 106.;"
glutathione S-transferase domain-containing protein
BSR_Ace_UAPBR_inlet_p_17428_8
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6297..7202)
DNA (906bp) protein (302aa)
UPF0176 protein WQQ_38070 n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZAC0_9GAMM
UPF0176 protein WQQ_38070 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
rhodanese domain-containing protein
BSR_Ace_UAPBR_inlet_p_17428_9
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7312..8130
DNA (819bp) protein (273aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003604002
BSR_Ace_UAPBR_inlet_p_17428_10
Kangiella koreensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8186..8572
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037F1EA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV25993.1}; TaxID=523791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125).;"
BSR_Ace_UAPBR_inlet_p_17428_11
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8583..9392
DNA (810bp) protein (270aa)
Catalytic LigB subunit of aromatic ring-opening dioxygenase n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZAX2_9GAMM
Catalytic LigB subunit of aromatic ring-opening dioxygenase {ECO:0000313|EMBL:EIT68984.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
extradiol ring-cleavage dioxygenase class III protein subunit B
BSR_Ace_UAPBR_inlet_p_17428_12
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9550..10878
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00035F6081
Uncharacterized protein {ECO:0000313|EMBL:KFN44843.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
oxidoreductase FAD/FMN-binding protein
BSR_Ace_UAPBR_inlet_p_17428_13
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10933..11406)
DNA (474bp) protein (158aa)
Aha1 domain family protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D6Y5_MYXXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG02365.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;"
BSR_Ace_UAPBR_inlet_p_17428_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11425..12738)
DNA (1314bp) protein (438aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003614224
histidine kinase
BSR_Ace_UAPBR_inlet_p_17428_15
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12753..14096)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003669827
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AIF49248.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
BSR_Ace_UAPBR_inlet_p_17428_16
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14191..15402)
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00035FD74A
ABC transporter permease {ECO:0000313|EMBL:KGO97904.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_p_17428_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15415..16710)
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000380A4F1
ABC transporter permease {ECO:0000313|EMBL:EIL90149.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC transporter ATP-binding protein
BSR_Ace_UAPBR_inlet_p_17428_18
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16719..17441)
DNA (723bp) protein (241aa)
phosphonate ABC transporter ATP-binding protein n=1 Tax=Singularimonas variicoloris RepID=UPI000370604D
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIF49261.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
BSR_Ace_UAPBR_inlet_p_17428_19

Not on your lists

comp(17536..18813)
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003647C91
ABC transporter permease {ECO:0000313|EMBL:EQD34622.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ABC transporter permease
BSR_Ace_UAPBR_inlet_p_17428_20
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18810..20225)
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036A7E21
outer membrane channel protein TolC
Tax=RBG_16_Gammaproteobacteria_57_12_curated
BSR_Ace_UAPBR_inlet_p_17428_21
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20448..22079
DNA (1632bp) protein (544aa)
SulP family inorganic anion transporter n=1 Tax=Singularimonas variicoloris RepID=UPI00036FFA5D
Putative sulfate transporter {ECO:0000313|EMBL:EIT72186.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
yvdB; Putative sulfate transporter yvdB
BSR_Ace_UAPBR_inlet_p_17428_22
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22098..22964
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003717290
spermidine synthase-like protein
Tax=BJP_IG2103_Dechloromonas_63_51
BSR_Ace_UAPBR_inlet_p_17428_23
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22984..23157)
DNA (174bp) protein (58aa)
CopG/DNA-binding domain-containing protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TEN9_9GAMM
CopG/DNA-binding domain-containing protein {ECO:0000313|EMBL:EIT72188.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
ribbon-helix-helix , copG family protein
BSR_Ace_UAPBR_inlet_p_17428_24
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23293..23679)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036EC928
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
apaG; ApaG protein
BSR_Ace_UAPBR_inlet_p_17428_25
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23699..24253)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003622BCA
FeS assembly SUF system protein SufT {ECO:0000313|EMBL:EIT71822.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
FeS assembly SUF system protein SufT
BSR_Ace_UAPBR_inlet_p_17428_26
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24385..27483
DNA (3099bp) protein (1033aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TDP1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT71823.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
acriflavin resistance protein
BSR_Ace_UAPBR_inlet_p_17428_27
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27555..28601
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZIS3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT71824.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
secretion protein HlyD
BSR_Ace_UAPBR_inlet_p_17428_28
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28709..29518
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037677A7
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:KCB45691.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
alpha/beta hydrolase fold family protein
BSR_Ace_UAPBR_inlet_p_17428_29
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29593..29859
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003614630
Uncharacterized protein {ECO:0000313|EMBL:ELQ02895.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
hypothetical protein
Displaying 29 items

View Taxonomy